Conserved Protein Domain Family
ZF-HD_dimer

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pfam04770: ZF-HD_dimer 
ZF-HD protein dimerization region
This family of proteins has are plant transcription factors, and have been named ZF-HD for zinc finger homeodomain proteins, on the basis of similarity to proteins of known structure. This region is thought to be involved in the formation of homo and heterodimers, and may form a zinc finger.
Statistics
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PSSM-Id: 398439
Aligned: 54 rows
Threshold Bit Score: 60.7243
Threshold Setting Gi: 75121669
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ERM94478      30 ILYRECLKNHAASLGGHAL-DGCGEFMPi-SGEilATg------iSPEDLKCAACGCHRNFHRREIE 88  Amborella trichopoda
XP_002982807  25 VLYKECVRNINAENGGEEVhDGCQKFTA--AGK--DG--------SPEALKCAACGCHRNFHQQESE 79  Selaginella moellendorffii
CAN66937      67 VIYKECRKNHAASIGGYAV-DGCREFMA--AGE--EG--------TSASFKCAACSCHRNFHRKEVE 120 wine grape
XP_009104753  32 IRYVECQKNHAANIGGYAV-DGCREFMA--AGV--EG--------TDDSLRCAACGCHRNFHRKEVN 85  field mustard
NP_001234189  24 VRYVECQRNHAASVGGYVI-DGCREYMP--EGT------------TSGTLNCAACGCHRNFHRREVE 75  tomato
XP_015583772  28 VRYGECQKNHAANVGGYAV-DGCREFMAs-NGE--EG--------TTAALTCAACGCHRNFHRREVE 82  castor bean
KRH18477      20 VKYGECQKNHAANVGGYAV-DGCREFMA--SGAtgEG--------TSAALTCAACGCHRNFHKRQET 75  soybean
ERM97227      88 VRYKECRKNHAASVGGYSV-DGCREFLA--GGE--EG--------TAAALTCAACSCHRNFHKREED 141 Amborella trichopoda
RWW16182      30 VKYAECRKNHAASIGGYAI-DGCCEFIA--DGE--EG--------SPGALKCAACGCHRSFHRRVQD 83  Ensete ventricosum
Q6ER22        22 VRYGECRRNHAASTGGHAV-DGCREFIAaeDGG--GGnstsavgvAAAALKCAACGCHRSFHRRVQV 85  Japanese rice
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