3QR8


Conserved Protein Domain Family
Phage_base_V

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pfam04717: Phage_base_V 
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Type VI secretion system, phage-baseplate injector
Family of bacterial and phage baseplate assembly proteins responsible for forming the small spike at the end of the tail or bacterial pathogenic needle-shaft.
Statistics
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PSSM-Id: 398408
Aligned: 61 rows
Threshold Bit Score: 50.2627
Threshold Setting Gi: 503426344
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3QR8_A             19 RTGIIVETD--LNAGRCRVQTG-GXCTdWLQWLTHRAGRSRTWWAPSVGEQVLILAVGGELDTAFVLPGIY 86  Escherichia virus P2
bbmufp:Hsero_0897  17 RTGKIAE----IRADKVRVRLSpSLLTtWLQWVALRAGDVVDWCPPSVGEQVIVLSPNGDLTQGKVLAGLF 83  Herbaspirillum sero...
jgi:Tgr7_1633      20 QPGRIEQAEytTTPPRVRVRLA-DRLSdWVPFVAGRAGNDKSWWPPEVGEEVMVLSPNGEALAAVALAALY 89  Thioalkalivibrio su...
AAG04005           17 LPCVVVAVD--LAAARVRVRSG-DWTSgWLRWHSLAAGKVRHWRAPSIGEQGVLLSPSGGVSMGTFIPGLY 84  Pseudomonas aerugin...
WP_014402471       17 LPCVVEAVD--PVQQRIKVSNG-DWISpWVRWHSGAAGAVQIWRVPSVGEPGVLLSPSGTVAAGTFVPGLL 84  Frateuria aurantia
Q88IE8             17 IKGYVVAVD--LMAGRLRMTDGsDWVSaWVKWHALAAGKARHWRSPSLGEQGALISPSGDPAQGTFVPGLY 85  Pseudomonas putida ...
Q8XY38             15 RLGTITDVRh-STPPAVRVRTG-GITTtWRPWAERRAGRTRTWNPPTVGEQVLLFCPSGDPANAVILCGIP 83  Ralstonia solanacearum
Q19UW8             18 RLGTIAEVD--LTTATARVNSG-GITTdFLPWLTFRAGTSQTWSAPTVGEQCVVLSVSGEFTTGVILFGIY 85  Mannheimia virus PH...
WP_011802669       19 RAGTIAAVD--HAVARCRVTSG-GLTTdWLQCFTSRAGNIRTWSPPSIGEQCLVLSPGGDTAAGFVLVGLY 86  Polaromonas naphtha...
nioo:CFU_1007      24 RVGSVIELD--YDAKLVRVQVGkNTPT-WRPWAVHRAGDAQTWWPPSIGEQVILLSPEGNFDNAVILPAMY 91  Collimonas fungivor...
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