Conserved Protein Domain Family
PLATZ

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pfam04640: PLATZ 
PLATZ transcription factor
Plant AT-rich sequence and zinc-binding proteins (PLATZ) are zinc dependant DNA binding proteins. They bind to AT rich sequences and functions in transcriptional repression.
Statistics
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PSSM-Id: 398359
Aligned: 59 rows
Threshold Bit Score: 77.6892
Threshold Setting Gi: 552837874
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001422627  90 RRSSYHN--VVRVQDVCKLMDVTGIQTYIINSARVVFLNERPHPRSTNKKDgeklmnhssssgrgagsgeryragagaqa 167  Ostreococcus l...
EFJ50820     243 mghaaarvaVVRIGDLGKLYDISEIQQYVINNGKVIFLRARPQAPKPGGYTi---------------------------- 294  Volvox carteri...
XP_005851752  61 RRSSYHD--VVKMADISRYADIGGIQGYTINSSKVIFLRRRPQPRppkga------------------------------ 108  Chlorella vari...
EFJ34121      57 RRASHMD--AVRVHDIQKLADISNIQTYTINSAKIVFLLSRPQDRiaka------------------------------- 103  Selaginella mo...
XP_002992505  58 RRASHMD--AVRINDLHKLLDTTGIQPYTINGAKIAFLLSRPQSRlakg------------------------------- 104  Selaginella mo...
XP_002988948  66 RKASHMD--SIRVVDIQQCLEVSDIQTYSINSAKIVFLLSRPQPRpskg------------------------------- 112  Selaginella mo...
KQJ93918      78 RRSSYSD--VIRVAEAEEVADVSLVQTYVINADRVVFLNPRPTAPGHGSKCvga-------------------------- 129  stiff brome
XP_020169332  72 RKSSYRE--VIRVAELKAVADISLVQTYVINYDRVVFLNRRPQAPQHGVKCvgp-------------------------- 123  Aegilops tausc...
VAH37432      21 gE-------VIRVAQLDEVADMSLVQPYVVNHERVVYLNPRSQAPQHAVKCfrp-------------------------- 67   durum wheat
VAH37431      15 RRSSYKNsmVIRVAELEEVADMSLVQPYVVNHERVMYLNPRPQAPERAIMCfsp-------------------------- 68   durum wheat
XP_001422627 168 qmhsECSYCARILQSDNNKYCSISCKM 194  Ostreococcus lucimarinus CCE9901
EFJ50820     295 ---pTCYYCHRALMEPSSRFCSMECKL 318  Volvox carteri f. nagariensis
XP_005851752 109 vgasLCTVCSRHLQDV-SHYCSLQCKL 134  Chlorella variabilis
EFJ34121     104 -athWCQNCNRTLTDP-TCFCSISCKL 128  Selaginella moellendorffii
XP_002992505 105 -slrCCETCGRSISDP-LRFCSISCKL 129  Selaginella moellendorffii
XP_002988948 113 -alhACLCCNRALSDD-VKFCSLACKL 137  Selaginella moellendorffii
KQJ93918     130 --agTCLECPRALIDAAFCFCSLGCKL 154  stiff brome
XP_020169332 124 --agACRECGRGLVDANFRFCSLSCKn 148  Aegilops tauschii subsp. tauschii
VAH37432      68 --agECLVCDRKLVEPIFHFCSISCKL 92   durum wheat
VAH37431      69 --agACLMCGRKLVDEIFRFCSLGYKL 93   durum wheat
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