Conserved Protein Domain Family
Ogr_Delta
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pfam04606: Ogr_Delta 
Ogr/Delta-like zinc finger
This is a viral family of phage zinc-binding transcriptional activators, which also contains cryptic members in some bacterial genomes. The P4 phage delta protein contains two such domains attached covalently, while the P2 phage Ogr proteins possess one domain but function as dimers. All the members of this family have the following consensus sequence: C-X(2)-C-X(3)-A-(X)2-R-X(15)-C-X(4)-C-X(3)-F. This family also includes zinc fingers in recombinase proteins.
Links
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Statistics
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PSSM-Id: 428030
Aligned: 24 rows
Threshold Bit Score: 49.249
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q5HK52          302 CPQCGAPMAASNTTNTLKDGTKkriRYYSCSNFrNkgskvCSANSVRADVIEDY 355 Staphylococcus epidermidis RP62A
Q63LF6            7 CPHCGARGIARVLEQKSALAWE---IDYQCDDV-V-----CGHTYRARLEMTPT 51  Burkholderia pseudomallei
Q88FG4            8 CPHCHSRMRIRTSEGRHIFLRI---AYLQCTTE-A-----CGWSVRAEFEMTHE 52  Pseudomonas putida KT2440
WP_011697920      8 CPHCGCKMSKWRTPPMSTWSAE---YFYVCFND-E-----CSYYIRGWQHMKDT 52  Syntrophobacter fumaroxidans
Q6D9D8           10 CPKCGAWMRARTSLALDANVRS---IYRICTGQ-E-----CGFKCTSLQWYEVA 54  Pectobacterium atrosepticum
Q63LF7            8 CPCCGGEIEARHTEAMSATLRR---LYFVCDD--------CGFRTPAGLEILFS 50  Burkholderia pseudomallei
Q7NAC6            4 CPLCGKAAHARSSFEHSCHTKE---RYNQCQNI-N-----CGATFVSHETFVRF 48  Photorhabdus laumondii subsp. laumondii
WP_012203557      5 CPHCQEHAYTRTSLQLTSTSRE---TIFQCRNY-E-----CGHVFSAVTEINRT 49  Delftia acidovorans
Q2S7I7            5 CAECGNKAIITSRQVLDPKLAN---LYCVCKNA-E-----CGHSFVMNLAFSHT 49  Hahella chejuensis KCTC 2396
IEC:ABF-0018459  26 CPECGSKAVIRKTNRKHRQIAD---IYCACADV-E-----CGYTFVMNLTFSHT 70
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