5D5N


Conserved Protein Domain Family
Herpes_U34

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pfam04541: Herpes_U34 
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Herpesvirus virion protein U34
The virion proteins in this family include membrane phosphoprotein-like proteins such as UL34, Epstein-Barr and R50, from dsDNA viruses, no RNA stage, Herpesvirales. The family Herpes_BFRF1, pfam05900, has been merged in.
Statistics
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PSSM-Id: 398302
Aligned: 5 rows
Threshold Bit Score: 228.931
Threshold Setting Gi: 82005068
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5D5N_A   4 NKVLHQDLVQATRRILKLGPSELRVTD--------AGLICKNPNYSVCDAMLKTDTVYCVEYLLSYWESRTDHV-----P 70  Human herpesvirus 5 s...
Q9QJ35   6 KEKMYDELLSATCRILKLGSHDYRMTE--------RNLLSKNPKFPLCDIILKLDYAYNLEYLLSLWEHVTKQE-----P 72  Human herpesvirus 6 s...
F5HA27   5 GKRVVDELCRVVSSYLGQSGQSLDLERci----dgAPVYAKGGATAICTVRMQHGCVYHLEFVYKFWAHLLEEMhypfsP 80  Human herpesvirus 8 s...
Q9E6N5  11 RAGLIARIKLIVRGDLTTGNYDPVLAEsfsgciptRSAFQFSGADGV-------ESAFPVEYVMRMMNDWAKGEc---nP 80  Marek's disease herpe...
Q66669   4 SKRLVAQLCQVVRSFICQPGTAVDLWQca----agPHVFAKGSTQPICIVKLVHGQIYNLEFVYKYWCHILQSEkfpysP 79  Equid herpesvirus typ...
5D5N_A  71 CFIFKNTGCAVSLCCFVRAPVKLVspaRH--VGEFNV-LKVNESLIVTLKDIEEIKPS-----AYGV----LTKCVVRKS 138 Human herpesvirus 5 s...
Q9QJ35  73 RFVFKNTGGAVSMSCYLHAPVKAE---GHhaVRECNI-LRVNECLTVRMSDIVAMKPS-----TFAV----FTKCIIRRN 139 Human herpesvirus 6 s...
F5HA27  81 CFVISNNGLSTTLKCFLCRPSDAVsqfGHvlPVESDVyLAKNTSVVLGQDDFTKFKASlvfskNLGV----YNSMVICRT 156 Human herpesvirus 8 s...
Q9E6N5  81 YIKIQNTGVSVLIEGFFDPPINATk--APlcTDKVNVlLNTTESTGIVLSDINKIKQS------IGVdcrpFQACLIVNC 152 Marek's disease herpe...
Q66669  80 VFIISNNGLAITLKCFLCEPMDLHsqfGRclSMDTDVyLPKNTSVVLSQDDFTKFKTNlvfskDLNV----FNSMVVCRT 155 Equid herpesvirus typ...
5D5N_A 139 n-SASVFNIELIAFGPENEGEYENLL-RELYAKKAASTS 175 Human herpesvirus 5 strain AD169
Q9QJ35 140 --RDETYVVEFVAFGPENESEYISLL-KAIFLKKCSMGK 175 Human herpesvirus 6 strain Z29
F5HA27 157 yfTDYRQVLQFLVVTPKSHKRLKSLL-ETVYCLAAPVAD 194 Human herpesvirus 8 strain GK18
Q9E6N5 153 fvRLPIVQLAFRFVGPSDPGRTTKLLdSAIAAYDAKIRQ 191 Marek's disease herpesvirus type 1 strain MD5
Q66669 156 ylTDFRQALQFLVVKAKNPKRVTAIL-GTIAQTLGLTPD 193 Equid herpesvirus type 2 strain 86/87
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