6K15,2COM


Conserved Protein Domain Family
SWIRM

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pfam04433: SWIRM 
SWIRM domain
This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.
Statistics
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PSSM-Id: 398234
Aligned: 232 rows
Threshold Bit Score: 41.3906
Threshold Setting Gi: 74698335
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6K15_D        89 FDI--SKIHEIEKRSNPDFFndssrfKTPKAYKDTRNFIINTYRLSP---YEYLTITAVrrnvamDVASIVKIHAFLEKW 163
EGP90069     447 NDPdrLHLHPQELKVASKLR------LHGNEYLLNKRRIFAAKLKSLqegTA-FNKTSAqnatsvDVNKASRLWSAFDSV 519 Zymoseptoria tr...
EGX47412     289 NDPdrHLLHKAEQHLASTLK------LSCGQYLTQKRLIFLERVTRLragNQVFSRTHAqqvchiDVNKASRLFAAFEKV 362 Arthrobotrys ol...
XP_007875625 211 NDPhvDQLHPAEVYLASQLR------LPAMVYLDNKRRIFAEYHARKeagLG-FRRTDAqrcariDVNKASRLWQAFERV 283 Pneumocystis mu...
XP_013025318 208 NDPhyHLLHPAEVHLASTLR------LPCMVYLDNKRRIFAEWHYRKqqgLG-FRKTDAqrasrvDVNKASRLWKAFHEE 280 Schizosaccharom...
XP_013932354 294 EDPlvEELHPAEVQLASTLR------LPPNVYLDSKRRIFFEKVKRLranLP-FRRTDAqkackiDVNKASRLYAAFEKI 366 Ogataea parapol...
Q6BX61       263 NDPnaDKIHPAEVLLASTLR------LPCNVYLDSKRRLFYEKVNRMksgMQ-FRRTDAqkacriDVNKASRLFAAFEKV 335 Debaryomyces ha...
XP_011271827 276 DDPllDKLHPAEATLASILR------LPCNLFLDSKRRLFAEKVTRMkkgLP-FRRTDAqkscriDVNKASRLFAAFEKI 348 Wickerhamomyces...
CCK70234     294 ADPlrDRLHPAELVLASILR------LPVDLYLDSKRRLFLEKYCKVqrgLP-FRRTDAqkacriDVNKASRLYQAFEKV 366 Kazachstania na...
XP_003676915 288 NDPlvDKLHPAEVQLAQILR------LPCDLYLDSKRRLFLEKVYRLklgLP-FRRTDAqkacriDVNKASRLFAAFEKV 360 Naumovozyma cas...
6K15_D       164 GLINY 168
EGP90069     520 GWFDE 524 Zymoseptoria tritici IPO323
EGX47412     363 GWLSP 367 Arthrobotrys oligospora ATCC 24927
XP_007875625 284 GWLD- 287 Pneumocystis murina B123
XP_013025318 281 GFFDD 285 Schizosaccharomyces cryophilus OY26
XP_013932354 367 GWLDD 371 Ogataea parapolymorpha DL-1
Q6BX61       336 GWLND 340 Debaryomyces hansenii
XP_011271827 349 GWLQD 353 Wickerhamomyces ciferrii
CCK70234     367 GWLDD 371 Kazachstania naganishii CBS 8797
XP_003676915 361 GWLKD 365 Naumovozyma castellii CBS 4309
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