3ZFS


Conserved Protein Domain Family
FrhB_FdhB_C

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pfam04432: FrhB_FdhB_C 
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminus
Coenzyme F420 hydrogenase (EC:1.12.99.1) reduces the low-potential two-electron acceptor coenzyme F420. This family contains the C termini of F420 hydrogenase and dehydrogenase beta subunits,. The N-terminus of Methanobacterium formicicum formate dehydrogenase beta chain (EC:1.2.1.2) is also a member of this family. This region is often found in association with the 4Fe-4S binding domain, fer4 (pfam00037).
Statistics
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PSSM-Id: 398233
Aligned: 183 rows
Threshold Bit Score: 86.0913
Threshold Setting Gi: 503390018
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3ZFS_C                97 LGTVAIPCQTMGIRKMQ-----TypfgvrFLADKiKLLV---GIYCMENFPYTSLQTFIcEKLGVS-MELVEKMDI---- 163
WP_013624679         157 VLFTGTPCQNAAVKNRLtktslS------------LSSVifcDLVCHGVSSPVIWADFI-RDLEKRyHSIITNYQFrpk- 222 Syntrop...
Q5LBN2               103 VLFSGTPCQVEGLKGYL-----Q------RSYDN-LLTV---DILCHGVPSPRVFHDYL-NFIRQNsDFHFTGIFMkdk- 165 Bactero...
Q8AAJ6               157 VLFTGSPCQVEGLKLFL-----R------KPYEN-LLTV---DLVCHAVPSPLIYKQYI-NMCSTKlGQKVMSINMryk- 219 Bactero...
CDE14313             532 VLYVGTPCQIAGLKNYL-----G------KDYEE-LLLV---DLVCHGVPSQKLFDKYL-TWLKKKnNSSIIEYEFrsk- 594 Clostri...
WP_013280215         153 VLYSGTACQIAGLKAFL-----D------KDYNN-LLCV---DVICHGVSSPLLYEKYI-EWLQEKkSCEVSLYHFrtk- 215 Butyriv...
CDA16252             161 VLFIGTPCQVNAIKNYC-----N------KDLQKnLITC---DLICHGVPSPGIFKKYY-NYISKKyNNNLKKYRFrnks 225 Clostri...
Q8AAS8               158 VLYTGTPCQVHGLKRYL-----G------KDYDN-LYTA---DVICHGVPSSKMFDAYI-DFLEKKhNGKLVDINFrdk- 220 Bactero...
goetting:Cspa_c12060 159 VIFTGTPCQIAGIKSFL-----R------KDYEN-LITI---DLVCHGVPSPLVFEKYK-EYMEKIhNSRIKHVNFrdk- 221 Clostri...
CDC79246             155 VLFSGTPCQIGALKNFL-----N------KDYEN-LITV---EVICHGVVSQKVFNAYH-RSLSAKnNCNIQSYEFrnk- 217 Clostri...
3ZFS_C               164 -----GK-GKFWVytqdd--vltlpLKETHG-----------Y-EQAGCKICK-DYVAELADVSTGSV--G--------- 211
WP_013624679         223 ---tsGYlSSNELchlek---glsvSLDQTWnqynplfyagiI-MRPSCYSCPyACLPRVSDITIADC--Ghvdlsaqql 293 Syntrop...
Q5LBN2               166 ---tfGWgYQNSRlffgk---nasqFNTVLSrlwndifyshlT-TRPSCHACRfTNYLRPGDITIGDF--Wgiekhhpqf 236 Bactero...
Q8AAJ6               220 --qtyGWsHRFSYcfyfe--ngqkaVDPVWVvnwgkiffsqmI-NRPSCHSCKySNLDRPGDFTIADF--Wddkknrpdl 292 Bactero...
CDE14313             595 --ekkSWgLNLKVkfes----gkerYIPANLdpyyksflngsT-YRECCYNCKyAKIERVGDITIADY--Wgiekehpdf 665 Clostri...
WP_013280215         216 --sdaGWgHYGKIvldk-----kkeQLFSSNdpyikafmtgqN-YRECCYECHyANRKRVSDLTLGDF--Wgiqssypel 285 Butyriv...
CDA16252             226 lfdkcGFrGKLTIgkk-------nkYFFANEdifyddflkerN-FRLSCYDCKyKESKRIGDFTLGDVnsWelyy---df 294 Clostri...
Q8AAS8               221 --krnGWsITLRYtieysndkrkdyYLINKLseyfmaflggyI-ERESCYSCPfSSMRRPGDITMGDF--Wgyqfkrpdl 295 Bactero...
goetting:Cspa_c12060 222 ---tkKWdEHNMTikfen---gaiyTKRGVDdafevgfykhlY-HRPSCHQCPfSRIPRVGDFTLGDL--Wgiddiipqi 292 Clostri...
CDC79246             218 ---diSWqRYTVKatfen---gkiyQKERMDdpymvgylkhsLyLRPSCTSCKyKGFPRAADITLGDF--Wgieki-kdf 288 Clostri...
3ZFS_C               212 -SPDGWSTVITRTDAGDSIFKQA-VEAGLFETK 242
WP_013624679         294 dLPNGISTVLTNTDKGASLLAAV-SPSLQLYES 325 Syntrophobotulus glycolicus
Q5LBN2               237 tDSRGISLIMLNNTKAEIVWNHI-KDDFNYLES 268 Bacteroides fragilis NCTC 9343
Q8AAJ6               293 ySCEGTSLLMVNTNMGLDLINKL-YDSIDLWKI 324 Bacteroides thetaiotaomicron
CDE14313             666 yDKNGVSAVIINTNAGFKAFENI-KDKVEYRDT 697 Clostridium sp. CAG:470
WP_013280215         286 yHRDGVSAVLINSIKGKEWMEQL-NTMACIKAV 317 Butyrivibrio proteoclasticus
CDA16252             295 yPELSSSLVIVNNEKAKKLFDML-ESDILYREI 326 Clostridium sp. CAG:571
Q8AAS8               296 kHDEGLSLIIVNSEHGKRIVDVLhRNGVQFNAV 328 Bacteroides thetaiotaomicron
goetting:Cspa_c12060 293 nDKKGISLLLFNTKKSEAFVKEI-KERAKLIEI 324 Clostridium saccharoperbutylacetonicum N1-4(HMT)
CDC79246             289 nTDLGASAVLLNSKKGAEIFKNI-ENKLYFEYT 320 Clostridium sp. CAG:964
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