3ZFS


Conserved Protein Domain Family
FrhB_FdhB_N

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pfam04422: FrhB_FdhB_N 
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
Coenzyme F420 hydrogenase (EC:1.12.99.1) reduces the low-potential two-electron acceptor coenzyme F420. This family contains the N termini of F420 hydrogenase and dehydrogenase beta subunits,. The N-terminus of Methanobacterium formicicum formate dehydrogenase beta chain (EC:1.2.1.2) is also a member of this family. This region is often found in association with the 4Fe-4S binding domain, fer4 (pfam00037).
Statistics
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PSSM-Id: 398226
Aligned: 183 rows
Threshold Bit Score: 45.9314
Threshold Setting Gi: 503645414
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3ZFS_C                   9 IVSARSTDREIQKLAQDGGIVTGLLAYALDEGIIEGAVVAGPG----EEfwK-PQPMVAMSSDELKAAAGTKYTFSPNVM 83 
WP_014587547            94 tFVGHADE--HRSAGASGGMATWLLERLLAEGIVDHVVCVAPTgd----peRlFSFSVFDDPPAVRAGAGSAYCPVEMSG 167 Metha...
jgi:Mpal_0828           94 VYRGYSER--YRPASSSGGVATWILDSLLAAGVVDHIVCVVPTgd----peRlFAFQVFETREDVRSGAGSAYYPVELSA 167 Metha...
A0B7S3                  94 TYVGYSKK--HRPISASGGVATWLLETLLSEGVADYVICVVPTgd----pdRlFAFRVFDAPGEVHAGAGSAYYPVEMSR 167 Metha...
ESQ13471                77 thVGFVTDPEHRASSTSGGLITWIAEKLLSEGIVDAVACVVPSehaaPQ--RlFEYRLVTDLNELKQARKSRYYPVQFSK 154 uncul...
PRJNA210423:M911_11680  86 lcAAAVSRDASRLASSSGGLATWLLASLVEAGEIDGVVHVVSVpggaG---PhFHYRLSRTPEEIRQGAGSRYYPVQWSE 162 Ectot...
jgi:Xcel_2892          115 TFAGRVTDDDALVGSSSGGLASWLLAQLLERGEVDAVIHVGAGe-------DeLFEDLISGPGELGRRRKSRYFATTLAD 187 Xylan...
CDD20530                71 AWASWSDDEEVRKKCSSGGIGFEIGRQLLQEGYNVVGCRYDITnq-------raEHYIATTVEELIPSIGSKYIQSYTTE 143 Prevo...
CCZ80616                77 SYAAWSKQKEIRQKCSSGGIAYELGKQLLEQGYKACGVRYNVQmq-------raEHFIATTPQEYIQSIGSKYIQSYTLE 149 Odori...
CCY60921                71 gYVATNTNHDQLMKSSSGGAFSAFATEILQNGGVVYGAAYEIKngn-----yvLQHIRINTIEELPKLQGSKYVQSTIFD 145 Clost...
3ZFS_C                  84 MLK 86 
WP_014587547           168 AIR 170 Methanosaeta harundinacea
jgi:Mpal_0828          168 VVR 170 Methanosphaerula palustris E1-9c
A0B7S3                 168 AVR 170 Methanothrix thermoacetophila PT
ESQ13471               155 IIp 157 uncultured Thiohalocapsa sp. PB-PSB1
PRJNA210423:M911_11680 163 VLA 165 Ectothiorhodospira haloalkaliphila
jgi:Xcel_2892          188 VLp 190 Xylanimonas cellulosilytica DSM 15894
CDD20530               144 Afk 146 Prevotella sp. CAG:732
CCZ80616               150 Afq 152 Odoribacter laneus CAG:561
CCY60921               146 ALp 148 Clostridium sp. CAG:264
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