4DM5


Conserved Protein Domain Family
SmpA_OmlA

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pfam04355: SmpA_OmlA 
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SmpA / OmlA family
Lipoprotein Bacterial outer membrane lipoprotein, possibly involved in in maintaining the structural integrity of the cell envelope. Lipid attachment site is a conserved N terminal cysteine residue. Sometimes found adjacent to the OmpA domain (pfam00691).
Statistics
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PSSM-Id: 398173
Aligned: 99 rows
Threshold Bit Score: 51.4031
Threshold Setting Gi: 379318612
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4DM5_A         14 TFRNEPLVKDVEKGXSQQEVLRIGGTPSGTqkRLXKPG-SCNsYILNKDGQ----------------QQPFYVSFDGSGK 76  Pseudomonas ae...
Q87VN2         31 TYRNEPLVKQVENGMTRQQVLTIGGEPSTTieRKVNTG-TCNnYVMNKDGH----------------KQVYHVSFNSDGR 93  Pseudomonas sy...
Q9JXT1         53 TFPTYDELDQMRPGLTKDDIYKILGRPHYDe-SMYGVR-EWD-YLFHFHTPgvgidpentsgvedvtTCQYKVIFDKDKF 129 Neisseria meni...
WP_012018563   29 TFRDEPLVKQVDHGMTQEQVRTLGGPPSSQf-EHSLSGsTCNnYVLNVDGH----------------EQPYYVNFDVNGR 91  Pseudomonas me...
Q2NRT5         29 SYVNKPVVSDVKKGMTKEQARAIGGVPATSs-TMINARgTCDsYVLGNRNGk---------------PINYFVSYDETGK 92  Sodalis glossi...
Q6D4H9         29 SYVNEPVVKDVKVGMTKQQVQQLAGSGMEK--RLVNAKgTCSdYLLKNRDGt---------------AQNYFVSYNDTGN 91  Pectobacterium...
Q63LV3         49 TFVNVENLRQIGPGLDKNQVYALIGEPHFSe-GIIGVH-VWN-YVFNFRTGpgas---------dvvTCQYQIQYDKHYR 116 Burkholderia p...
jgi:HSM_1317   53 SWPNWDNLRMVERGMNKDQLYNLLGRPHFSe-GLYGVR-EWD-YAFNYRENge------------hkICQYKILFDKNMN 117 Histophilus so...
WP_012108653   53 LSVNLENIRKIETGMSKDEIRKLIGTPHFAa-GLAYVV-EWD-YLFNLKEKaad----------kdmICQYKIVYDFDTY 119 Campylobacter ...
jgi:Rmet_5708  76 TFPNIDNLRMLAPGMTKSQRYPLLDRPHFNe-GFLGVR-EWD-YLFNFRTGraap--------ndvvQCQMKVVFDKNEK 144 Cupriavidus me...
4DM5_A         77 VDGS 80  Pseudomonas aeruginosa PAO1
Q87VN2         94 VTNK 97  Pseudomonas syringae pv. tomato
Q9JXT1        130 ARSF 133 Neisseria meningitidis serogroup B
WP_012018563   92 VDSK 95  Pseudomonas mendocina
Q2NRT5         93 VLNK 96  Sodalis glossinidius str. 'morsitans'
Q6D4H9         92 VLNK 95  Pectobacterium atrosepticum
Q63LV3        117 VKST 120 Burkholderia pseudomallei
jgi:HSM_1317  118 AQNF 121 Histophilus somni 2336
WP_012108653  120 KAAS 123 Campylobacter hominis
jgi:Rmet_5708 145 TRAY 148 Cupriavidus metallidurans CH34
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