Conserved Protein Domain Family
NifZ

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pfam04319: NifZ 
NifZ domain
This short protein is found in the nif (nitrogen fixation) operon. Its function is unknown but is probably involved in nitrogen fixation or regulating some component of this process. This 75 residue region is presumed to be a domain. It is found in isolation in some members and in the amino terminal half of the longer NifZ proteins.
Statistics
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PSSM-Id: 398148
Aligned: 88 rows
Threshold Bit Score: 76.7313
Threshold Setting Gi: 504002510
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Slit_0912       3 RFQMGDMVFAAYDLFNEsleetGESsiPGVEPDALLAAAGTRGVVVNVGHAQEmpNAEIYLVRFemdaegtLAE--PIGC 80  Sideroxyda...
WP_013075654        4 VFNLEDVVECVRDIRND-----GTY--PMESRGAILARRSDRGVVVDRGWFLQ--DRLVYAVYF-------LSTgrIVGC 67  Kyrpidia t...
Q20XZ6              5 KYQWGQRVKAAIDLFND-----GSF--PEQPEGALLVQTGDAGEIVKIGSHVEt-DTPVYLVEF--------GPsrVVGC 68  Rhodopseud...
WP_012592593        8 KFEWGQRVRATADLFND-----GSY--PEQPENALLVRAGDAGEIVQVGSHVEt-ETPVYLVEF--------GEhrVVGC 71  Methylocel...
jgi:Bind_0402      10 RFQWGQRVQATEDLYND-----GSY--PDQPLDALLVKEGDLGEIVNVGVISEt-NRPLYLVEF-------DGQrlVVGC 74  Beijerinck...
jgi:HY04AAS1_0947   5 KFKVGDIVKTKRKIRND-----GTF--PGLPWDELLLPKGAEGVVIDIGRFLQ--TQVVYVVNF-------LEHgkIVGC 68  Hydrogenob...
jgi:Thal_0416       5 eiSVGDIVRLRKKIKND-----GTF--PGVPWGEVIVDKGEVGVVMDIGYFLM--TNKVYTVYF-------PRLdiLVGC 68  Thermocrin...
jgi:FsymDg_2796    14 AYDVGDTVVAVKDLRND-----GTFpePGISVGDVLVETGTVGHIHGVGVYLQ--EHIVYAVAF--------SNgrVVGC 78  Candidatus...
Q0RAW3              5 TYDVGDVVTAAKALRND-----GTYpdPAISIGEILVEAGTRGQVINVGLYLQ--EHIVYAIAF--------ENgrIVGA 69  Frankia al...
WP_020464273        4 TFDVGDVVATTKALRQD-----GTFpdPNIATGQILVEPGTRGEVINVGLYLQ--EHIVYAVAF--------ENgrVVGA 68  Frankia sp...
jgi:Slit_0912      81 LSDELT 86  Sideroxydans lithotrophicus ES-1
WP_013075654       68 LESELK 73  Kyrpidia tusciae
Q20XZ6             69 LEDEIA 74  Rhodopseudomonas palustris BisB18
WP_012592593       72 LEDEIT 77  Methylocella silvestris
jgi:Bind_0402      75 LEEELA 80  Beijerinckia indica subsp. indica ATCC 9039
jgi:HY04AAS1_0947  69 LEHELE 74  Hydrogenobaculum sp. Y04AAS1
jgi:Thal_0416      69 LGSELE 74  Thermocrinis albus DSM 14484
jgi:FsymDg_2796    79 LERELD 84  Candidatus Frankia datiscae
Q0RAW3             70 LERELE 75  Frankia alni ACN14a
WP_020464273       69 LERELE 74  Frankia sp. EAN1pec
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