1VRQ


Conserved Protein Domain Family
SoxD
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pfam04267: SoxD 
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Sarcosine oxidase, delta subunit family
Sarcosine oxidase is a hetero-tetrameric enzyme that contains both covalently bound FMN and non-covalently bound FAD and NAD(+). This enzyme catalyzes the oxidative demethylation of sarcosine to yield glycine, H2O2, and 5,10-CH2-tetrahydrofolate (H4folate) in a reaction requiring H4folate and O2.
Links
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Statistics
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PSSM-Id: 427830
Aligned: 84 rows
Threshold Bit Score: 96.8485
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1VRQ_D          3 LIECPNCGPRNENEFKYGGEAHVAypEDPNALSDKEWSRYLFYRGNKKGIFAERWVHSGgCRKWFNALRDTVSYEFKAVY 82 
WP_013148115    3 LLTCPMNGTRPLSEFVFGGEYRQA--PDQDTCTDAEWAAYVHNRSGAPGDKKEWWYHSP-SGTWFIAERNTLTDKVTRTY 79  Methylotenera ...
WP_013443135    3 LLTCPVNGTRPLSEFVFGGEIRNM--PDPAQASDSAWAAYVYNRSGAPGLKKEWWYHSP-SGTWFVAERNTLTDQVARTY 79  Methylovorus
Q1AT59          3 ILNCPINGPRPIHEFIYGGEFRDM--PDVDAVTDGEWVDYLYNRSGVPGIKREWWYHVA-SNVWFIAERDTATNVVCKTY 79  Rubrobacter xy...
jgi:Tgr7_1695   3 LIPCPKVGTRPASEFVYGGLWRPM--PDPDSTTDMAWSHYVFHRDGAPGVQREWWCHAP-TGMWFVAERDTLKDEFLRTL 79 
WP_023787600    3 IMTCPVNGPRNISEFAWGGEIKPQ--PDPATCTDAEWTDHLFLEANTAGVVSEWWLHTP-TNTWFVARRNTVTDEVLETM 79  Hyphomicrobium...
Q883B7          3 IMTCPLNGPRNISEFTYGGEFKPM--PDPQTCSDAEWADYVFNSEDTLGVVREWWMHTP-TNYWFLAERHTGSDEIIRTF 79  Pseudomonas sy...
Q6F9E8          3 IMHCPLNGPRNISEFTYGGEFKDM--PDQNTCSDLEWADYVFNTDNIAGVVLEWWMHTP-SSYWFIAQRHTVTDEIIRTF 79  Acinetobacter ...
jgi:Pmen_3473   3 IMNCPLNGPRNISEFTYGGELKAM--PDPATCSDSEWADYVFNSDNAAGVVREWWLHNA-SSYWFLAERHTVSDKIIRTF 79 
WP_013661563    3 LMNCPLNGPRNISEFVYGGEVRAM--PNPATCSNEEWADYVFYSDNNVRIVKEWWYHSP-SGYWFIAERHTASDDIINTY 79  Marinomonas me...

1VRQ_D         83 RA 84 
WP_013148115   80 LL 81  Methylotenera versatilis
WP_013443135   80 LY 81  Methylovorus
Q1AT59         80 LF 81  Rubrobacter xylanophilus DSM 9941
jgi:Tgr7_1695  80 TV 81 
WP_023787600   80 TA 81  Hyphomicrobium nitrativorans
Q883B7         80 DP 81  Pseudomonas syringae pv. tomato
Q6F9E8         80 DP 81  Acinetobacter baylyi
jgi:Pmen_3473  80 DP 81 
WP_013661563   80 DS 81  Marinomonas mediterranea
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