3KEP


Conserved Protein Domain Family
Nucleoporin2

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pfam04096: Nucleoporin2 
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Nucleoporin autopeptidase
Statistics
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PSSM-Id: 397975
Aligned: 179 rows
Threshold Bit Score: 107.961
Threshold Setting Gi: 124457592
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3KEP_A         19 SFGYWCSPSPEQLERLSLKQLAAVSNFVIGRRGYGCITFQHDVDLTAFtkSfREELfgkiVIFRSsKTVEVYPDE--AT- 95   baker's yeast
XP_002141590  945 KPSYYCIPSIEALSTFTEDRLAAVEDFRVIREGVGEIMWPGLTDLRGL--N-LDHI----ISIEP-LCVSVYGED----- 1011 Cryptosporidi...
Q5CUL4        906 KHDYFCIPSIELLKTFSEERLAVVEDFKIVREGVGEIVWPGVTDLRGI--N-LDSV----VSIEP-LCVSVYGDG--DSs 975  Cryptosporidi...
Q6BGM0        536 KPDYLCNVNFDEM---TEEELSNVENFTISNQ-FGQVRWLSPCNLLYL--D-LDKI----VDLTQ-ECINLYDSEivn-d 602  Paramecium te...
A0CZF0        557 KQGYYTLPDINQL---TINQLKNVEDFTIFNE-FGSLRWDSPTNLLYI--N-LDRI----VDIQD-SKVEVYDLDqih-e 623  Paramecium te...
XP_001032777  784 TSDYIINPPLEELQTYSLKELKNVHNFSVEGH-YGKLEWQEPVDLTDL--D-IDKT----IYIRD-QQIQVYPEVeya-s 853  Tetrahymena t...
XP_651001     172 KQGYVCNPSMQTLKAMSIEQLKDVSSFEVSRPGYGKVMW-SKVDLTNV--N-LDIS----IIIER-GYCDVYPDG--IQ- 239  Entamoeba his...
CBJ49271      805 LEEYKTEPSMAELAKMTKDALTAVSGFVVTRQGYGSIAWKEPVDLRGV--D-IGSV----VAIEH-KSVSVYDEL--AEg 874  Ectocarpus si...
EED91206      652 KTGYNVYPPISELETMSEADLAAVADFKVERPGYGSVAWDGSVDVRGV--D-LDSV----VVIET-KNVSVYDDAelNGd 723  Thalassiosira...
CEM32306      825 NMEYSCTPSIESMREMTEQELASVQDFTIRRGGVGEARWPGRTDMRQV--N-LDRD----VKLEQ-GYIEVYPNE---At 893  Vitrella bras...
3KEP_A         96 --KP--XIGHGLNVPAIITLENVYPVDKKTKKPXKDTTKFaEFQ-VFDRKLRSX----REXNYISYNPFGGTWTFKVNHF 166  baker's yeast
XP_002141590 1012 --DStiPVGEGLNKKAIILLKNCKPK------NISTSGNIeEFNaKRISQIKSYte-qMGATFISLDTVTWDWRFEVVHF 1082 Cryptosporidi...
Q5CUL4        976 --I---PIGEGLNKKAIITLKNCKPK---RAIPSKDPQEIdEFNsNRVKQIKSYte-qMGARFISLDTITWEWKFEVTHF 1046 Cryptosporidi...
Q6BGM0        603 ylKP--DIGKKLNKECEITFNLPANLKIN------------DAS-KFEQNLRQQae-gKNIEFLRFDSENRSYTFKVQHF 666  Paramecium te...
A0CZF0        624 ylKP--KVNKKLNKSCLITLKVPITINKD------------NYE-TEHKFLQQKck-eQNIELIEIDQIKQQFIVRVDHF 687  Paramecium te...
XP_001032777  854 kyKP--KVGEGINNKCMITYKNASSIQ--RKIKSGELNLQ-TVI-KCIKKQSDE----QNVQFVKFDQKNLTWTILVDHF 923  Tetrahymena t...
XP_651001     240 --KP--RFGEKLNKEATIVLENVVDT-VE------------EFR-KLLPRLSKK------VDIKSYEENTKTVTFVVPHF 295  Entamoeba his...
CBJ49271      875 eeKP--ALGEGLNKPTRVTLYNIFPK-------AADPSDA-EKR-RYEARVSKNte-kIGAKLVSYDVDIGEWVFETFHW 942  Ectocarpus si...
EED91206      724 --KP--RQGSKLNRPAVITMFGIYPK---GGAESSVEAKE-KLK-KKIEKSTKK----MGADLLSFDADGGVWTFRVGHF 790  Thalassiosira...
CEM32306      894 --KP--EVGSKLNKRCEVMLKLGVDM-QENFASLKRQFDN-WRE-RAGERIRVAtervPAAHFINLNVDQLEWHFWVEHF 966  Vitrella bras...
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