Conserved Protein Domain Family
tRNA_edit

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pfam04073: tRNA_edit 
Aminoacyl-tRNA editing domain
This domain is found either on its own or in association with the tRNA synthetase class II core domain (pfam00587). It is involved in the tRNA editing of mis-charged tRNAs including Cys-tRNA(Pro), Cys-tRNA(Cys), Ala-tRNA(Pro). The structure of this domain shows a novel fold.
Statistics
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PSSM-Id: 397958
Aligned: 65 rows
Threshold Bit Score: 57.2215
Threshold Setting Gi: 81539470
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q1IST4 258 TPGQKTIEQVAAYLG---------VSPKNKIKTLAYMMaapkgakdGREQ---ALVVLLRGDHMLNEAKLGAAIKg-REV 324 Candidatus Koribacter...
Q5QW31 256 EVQGDELAAVLQPLS---------VESQQATKSFIVKAad-----dIDSE---YVQLVLRADHELNTVKAEKLAQvaAPL 318 Idiomarina loihiensis...
Q1LSM8 245 APGIYTLTELVKLFN---------LPIEKIAQIIIVHA--------QQNAlypLVALMVRGDHSINYAQVEKLPQvaSPL 307 Baumannia cicadellini...
Q8D1V9 251 AEDILLTSDLAKKFN---------IDIKQIIKILLVHS--------IEKNh-pFIAIAIREDHEIDLQKVENLNQvkKPL 312 Wigglesworthia glossi...
P36431 257 TPNIRTIEDLEVFFN---------TPKHKILKTLVVKTcq-----kDSEK---FFAICIRGDRQINLTKVASFLQv-DDC 318 Chlamydia trachomatis...
A7HKV2 256 TPNVKTAQDVADFLG---------VPVRKIVKTLIYK---------GRNG---YFMALVPGDRELNEEKLKNFLNd-QSL 313 Fervidobacterium nodo...
B4U8B2 256 TPNIKTIEELSSFLN---------VAKSKIIKSVLYI---------KEDK---PIMVLIRGDKKIDEKKLERLFGt-DEF 313 Hydrogenobaculum sp. ...
Q1G9P3 257 TPGCDSIDKLAEFLQ---------VPATRIVKSVLYIV--------DEKK---KVLVLIRADKEVNEVKLTHLLDc-DSL 315 Lactobacillus delbrue...
Q8F148 257 TPGKKTISEVSTLLG---------VSESETIKAVALK---------SEKK---KILVFLRGDLELNLHKLHSLLKi-ADS 314 Leptospira interrogan...
A1SLL4 259 TPDTPTIETLVAHLNerfpredrpWAASDTLKNVVFSvhh----pdGATE---ALAVGLPGDREVDAKRLEAHLGegVVF 331 Nocardioides sp. JS614
Q1IST4 325 RPMTEEEIQDLFHSPAGYLGPLNVEwaktsedTEKPLLLLDEALVSRKNLIAGANKEEYHVRNLTP-GESF 394 Candidatus Koribacter versatil...
Q5QW31 319 EILTETEKAT--GVEAPYIGVVNAK----------LPLLVDSSAAHLADFACGANENGQWLTGVNW-KRDT 376 Idiomarina loihiensis L2TR
Q1LSM8 308 VFATEDEIRLAIGVGSSSLGPINLP----------LPLIIDHSVAVMSDFVAGANIDGKYFFGINW-ERDL 367 Baumannia cicadellinicola str....
Q8D1V9 313 KFANYYEINKYFKVKKSYLGPVNIK----------CLLIVDKEAHCIKNFVSGANINNKYFFNINW-DRDV 372 Wigglesworthia glossinidia end...
P36431 319 ELASEEEILKHLHVEKGFIGPLYCP----------IPCYADETTRPMTNFICANNQKDVHCKHVNW-GRDI 378 Chlamydia trachomatis D/UW-3/CX
A7HKV2 314 AFATPDDILKDFGVPIGFLGPVGVK---------GIKVIADHLVKGMKNFVVGGMEKDYHFVNVNV-DRDF 374 Fervidobacterium nodosum Rt17-B1
B4U8B2 314 RLAEDDEVLRLLNTEKGFIGPFVEG--------KDIEIIVDNSLYNASNMVVAFNKPHYHYKNANIdFENF 376 Hydrogenobaculum sp. Y04AAS1
Q1G9P3 316 RVAETSDLEELTGAGKGGVGPVNADwa--------dEIVADKTVKGLYNVVVGAGESDAQFINANL-DRDF 377 Lactobacillus delbrueckii subs...
Q8F148 315 EPMTDLEIREL-GLIPGFISPIAPN--------DKIKVLYDRSLQKDFPYVVGSSKEDFHTQGFIL-EKEI 375 Leptospira interrogans serovar...
A1SLL4 332 EPFGEADFAARPTLAKGYIGPGALGek----kPAGVRYLLDPRVVEGTRWVTGADAAGSHVIDLVA-GRDF 397 Nocardioides sp. JS614
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