Conserved Protein Domain Family

pfam04021: Class_IIIsignal 
Class III signal peptide
This family of archaeal proteins contains. an amino terminal motif QXSXEXXXL that has been suggested to be part of a class III signal sequence. With the Q being the +1 residue of the signal peptidase cleavage site. Two members of this family are cleaved by a type IV pilin-like signal peptidase.
PSSM-Id: 397916
Aligned: 39 rows
Threshold Bit Score: 25.3496
Threshold Setting Gi: 297378784
Created: 11-May-2020
Updated: 7-Aug-2020
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
Format: Row Display: Color Bits: Type Selection:
jgi:Mvol_0713    2 KRAQISLELIILLFAVISVAAIAGYTY 28  Methanococcus voltae A3
Q2NF71           7 rLGQASVELILLFAGILIVVILAMNIY 33  Methanosphaera stadtmanae DSM 3091
Q8U3J4           2 KRAQTAIEYLLMLAAVLILVAIVLNVV 28  Pyrococcus furiosus
Q5JEF5           3 RRAQGALEYLFMLAAVLVLVAIAIRVa 29  Thermococcus kodakarensis KOD1
Q5JGK0           7 RKGQGAIEYLFMIAAALVIILIAVRYV 33  Thermococcus kodakarensis KOD1
Q5JH29           2 RRAQGALEYLFMVALALIMVTITIRYV 28  Thermococcus kodakarensis KOD1
agres:mru_0671  17 dKAQGSVELILLIGGIIVIVLVCMFVY 43  Methanobrevibacter ruminantium M1
WP_013413446     8 eKGQGAAEYMLLIGGALAIVLIALFIY 34  Methanothermus fervidus
jgi:Mfer_0365    8 eKGQGAAEYMLLIGGALGVVLVFLYVY 34  Methanothermus fervidus DSM 2088
O26634           6 lRGQGGAEYILLFAAIIVIAVAALYIY 32  Methanothermobacter thermautotrophicus str. Delta H
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