Conserved Protein Domain Family
YccF
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pfam03733: YccF 
Inner membrane component domain
Domain occurs as one or more copies in bacterial and eukaryotic proteins. These are membrane proteins of four TM regions, two appearing in each of the two copies when both are present. Many of the latter members also carry the sodium/calcium exchanger protein family pfam01699, which have multipass membrane regions.
Links
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Statistics
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PSSM-Id: 397686
Aligned: 421 rows
Threshold Bit Score: 32.7898
Threshold Setting Gi: 308198321
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_016759565   314 IFNVLWTLVFGWWLAIITAAGGVVCLVLGVfqpssgspgCREYGRVLINLAHYLFYPFG 372  Sphaerulina musiva SO2202
EFN50844       109 CANGVWCVLFGWQMALAHLTAALFQALTVI---------GLGTALTNVQLAQFAIWPFG 158  Chlorella variabilis
55_pfamImport    1 LGNILYVFLFGWWISLIYILICPVMFFASC---------GSPYGKLCLKMALYFIWPFG 50  
XP_787831      139 VSNVVYALLIGWFMALIYTLVGVLMLITVV---------GWRHGIYCFQLGRYFLWPFG 188  purple sea urchin
EKC36079       139 fWNVLYAVLFGWWVAVVYCVVGGLMYATII---------GKDYAFFCFRMAHYFLWPFG 188  Pacific oyster
EFC37744       195 FGNIVYSLLWGWWLFLSYIFVALLCYLTIF---------CIPYGNKCLSMAFYYFWPFG 244  Naegleria gruberi
EFC44904       112 IGNVLYVIFIGWWMFLTYLMVGVLSCLAIF---------TIPYGLKCFKFSFYYLYPFG 161  Naegleria gruberi
EAX93477        57 fQNILWTVLCGWWVSICIVITALLLILTGF---------GYKIGIRLFGLAKFVLYPFG 106  Trichomonas vaginalis G3
EAY21922        70 VSNIIWSIFIGWWVAIAFVVVGILFFLTGF---------FYRHGIFCFRAAYFIVFPFG 119  Trichomonas vaginalis G3
XP_001307308    71 VGNILWTLFFGWWVSLSFVILSLFFFITIV---------FYKHGLFCLRAAWFVLYPFG 120  Trichomonas vaginalis G3
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