1GQL


Conserved Protein Domain Family
Glyco_hydro_67N

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pfam03648: Glyco_hydro_67N 
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Glycosyl hydrolase family 67 N-terminus
Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans. This family represents the N-terminal region of alpha-glucuronidase. The N-terminal domain forms a two-layer sandwich, each layer being formed by a beta sheet of five strands. A further two helices form part of the interface with the central, catalytic, module (pfam07488).
Statistics
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PSSM-Id: 397627
Aligned: 23 rows
Threshold Bit Score: 114.689
Threshold Setting Gi: 81534694
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1GQL_A         6 MWLRYQPIADQTLlkTYQKQIRHLHVAGDSPTINAAAAELQRGLSGLLNKPIV-ARDEKLKDYS------LVIGTPDNSP 78  Cellvibrio japo...
Q024C1        23 AWLRYAPLSDAAArpYLTALPAAVTVYGASPVVQSAQRELLRGVRGMLGRTLR-MESKLPAERA------ILLGTAGDLQ 95  Candidatus Soli...
Q1IT34        26 AWLRYARLHEATAk-QFQSLPKLVVTLGDSPPIGSAQTELKRGLARMLGREIR-ASKQTPTQDF------ILLGVRDQIE 97  Candidatus Kori...
WP_008199742  27 LWMDYQKIENLELktEVSDLLSNIYFFGKNPTYEAIKNELKLASDSWIGRSPK-FSQERLTSAK------FYLGTREEFS 99  Algoriphagus ma...
WP_012634595  18 CWLGYHLLENGELreNYSQWASNIVISKEPDEIKIALSELKSGINGILGVDAV-VVTREPEQSSc-----IALGVLGRGQ 91  Ruminiclostridi...
P96105         6 CWLEYRGLPADVAg-KLKDWFSSVSILE--PGSSVLKDEIRRFSERSIGITPRfYSRPLKKEKY------IMVGRLESLP 76  Thermotoga mari...
Q9A4L9        25 LWLRYKPVAESARv-AYAARAAAIAPVAETPTLTVARAELERGLTGLVGQPA--SAAAGARDGV------ILLASGATPA 95  Caulobacter vib...
Q8P3G9        48 LWLRYHLLPDAAQ---KQGSARELVVLGATPTLQAAGDELQRGLHGLLGVAPT-LTQAATRDGA------IVLGTAQTPQ 117 Xanthomonas cam...
Q21LZ2        51 LWLDYQPITNTREreGYIKALSPWQVEGEAATADFIRQELTAALGAMLGVEAG-PVGDYTHNSLahpvarLLVATPEESA 129 Saccharophagus ...
Q8A4H7        30 LWLRYHLIEDVALkrYYQIKNSSIVFTARTQKQLVAKTELYNGLKGLLGFTIQ-ETHDVKDNC-------LLVGNVESSP 101 Bacteroides the...
1GQL_A        79 Lia-sLNLGErlQaLGAEGYLLEQtrinKRHVVIVAANSDVGVLYGSFHL 127 Cellvibrio japonicus
Q024C1        96 AaipqLHLPPd---LPADSYLVTTvtanGAPHLVIAGANDRAVLYGVFAL 142 Candidatus Solibacter usitatus Ellin6076
Q1IT34        98 EmfanLHVPE----LAPDGFWLDWtevgGHKALVIAGGSDRGPLYGTFAL 143 Candidatus Koribacter versatilis Ellin345
WP_008199742 100 Qvl-sLTQQAeiKaLGEDGYWMGPveieGKTYFSIIGNKPVGVLYGTYKW 148 Algoriphagus machipongonensis
WP_012634595  92 Nid-sYVKYDevVqIGNEGFIIKAfktgNSEIVVVAGTTTKGLLYGVFSL 140 Ruminiclostridium cellulolyticum
P96105        77 Ik---LD-----VnLGEEGFMLRTiewnGSKILLVTGETKKALVYGIFDL 118 Thermotoga maritima MSB8
Q9A4L9        96 I----TGLGLplKtLGEEGYLIRTvtvgGKATTVIAANRDIGVLYGVFRY 141 Caulobacter vibrioides
Q8P3G9       118 I----AALGLatQaLGREGYLIRStrvdGHQATVIVGGSDVGVLYGAFHL 163 Xanthomonas campestris pv. campestris
Q21LZ2       130 Vir-sLALGDalTrVGQEGYLIKTtryrDKPITIVTANTHAGLLYGTFKL 178 Saccharophagus degradans 2-40
Q8A4H7       102 Lit-sLLCAKelDsLGDEGYIIRSlqieQKKVTVVVAQKDQGLLYAIFHY 150 Bacteroides thetaiotaomicron
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