6UPK


Conserved Protein Domain Family
SSrecog

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pfam03531: SSrecog 
Structure-specific recognition protein (SSRP1)
SSRP1 has been implicated in transcriptional initiation and elongation and in DNA replication and repair. This domain belongs to the Pleckstrin homology fold superfamily.
Statistics
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PSSM-Id: 397548
Aligned: 93 rows
Threshold Bit Score: 60.2609
Threshold Setting Gi: 121915493
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6UPK_H       106 GWNWGTVKFGGQLLSFDIGDQPVFEIPLSNVSQCT-TG---KNEVTLEFHQNDDAEVS----LMEVRFYVPPT 170
EAY20281      99 GLNEGVFFHDKHTFGIKDDGKPVIKVPYKTISNVq-SS---KNDFFVQILQEGRIEGh---qLENVRIFVPQN 164 Trichomonas vaginalis G3
XP_002899348 102 GGNWGDMKFEGPNLNFRTANASVMELPLEQISQCAlPG---KNEVELQFHEDDTVAGDee-tLVEMRLYLPPG 170 Phytophthora infestans...
CBJ29726      99 GGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQCVmPGvkkSNDVELQLHESDATDQTed-tLVAIRVTLPEK 170 Ectocarpus siliculosus
XP_002290767  84 GASWGNTDIANKHLFEPRDGEEMLSLDLGEVSQCVlPGn-nRNEIEMQFLESDTVEAGtd-qLVAIRFYVPPD 154 Thalassiosira pseudona...
EEA06186     111 GSNWGNAIIENDTFCIKNDDKILMYIPTTQINQIAlPS---KSEMVLEFSGETNSEENdd-kLVEIRFFIPNI 179 Cryptosporidium muris ...
Q8IL56       117 GWNWGEFKLENSNLCFDIDNKYAFNLPTNNINQLNvQI---KTDIAMEFKNDENNNKGnedfLAEIRFYYPHE 186 Plasmodium falciparum 3D7
ESS32119     130 GWHWGDVKMEGNNLQLTVDGCAAFDIHAQEIAQVTtPS---KNDLAIELIQDDTRDQQed-qLLEVRFYQPFA 198 Toxoplasma gondii VEG
Q4UAH0       125 GWHWGTYEFDNTTFRLRINNNSGLEIDAQSIIQATiPS---KTDLAIELKNANPLNNSd--dLVEIRFCVPSK 192 Theileria annulata
EDO07881     111 GWHWGVYGFENDTFKLTIDDNAGIDIDAKDVTQVTvPT---KTDLAVEFKQNKGYINGd--eLMEIRFCIPNK 178 Babesia bovis
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