Conserved Protein Domain Family
HA

?
pfam03457: HA 
Helicase associated domain
This short domain is found in multiple copies in bacterial helicase proteins. The domain is predicted to contain 3 alpha helices. The function of this domain may be to bind nucleic acid.
Statistics
?
PSSM-Id: 397496
Aligned: 245 rows
Threshold Bit Score: 34.1241
Threshold Setting Gi: 1194687894
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
EED92077     188 ERVFLARLEELREFKGKYGHTLVPekyEENSALGAWVSNLRSLYKRRRrsesmlergdtfkvvdtsddstirrekrsmni 267 Thalassiosira p...
EEC50462     285 QASWLARYEELKAYHAHHGDCLVPkdyPTNPPLSKWVSDQRNNMARSRkgi----------------------------- 335 Phaeodactylum t...
EEH58449     294 RVSWSERLQELGSFRKVHGHCNVPatyrhNIGLGSWVAYQRKSRra---------------------------------- 339 Micromonas pusi...
XP_002286169  80 EHAWNARYEELKQYIKEHGNSLVPgnykvNESLGIWVSKQRRNY---Kvrge---------------------------- 128 Thalassiosira p...
EED90083     152 EELWQQRIQELQQFKLQHGHCLVPrkydpNPSLSAWVATQRKNYnrrmk------------------------------- 200 Thalassiosira p...
XP_002180716 202 EEDWTTRLEQLQAYKKKHGDCLVPhgyVEDPSFAEWIHRQRTTYASMLkddk---------------------------- 253 Phaeodactylum t...
XP_002296684 587 DTKWNEMLLQLRDFKNEHGHCNVPt--NKATELGNWVVTQRRLYNKLItgkp---------------------------- 636 Thalassiosira p...
XP_002184270  76 RDDWQKHYEELKEYKKSNGHCNVParyvpNRRLGIWVSAQRQQYkivqtppe---------------------------- 127 Phaeodactylum t...
XP_002286505 381 TFSWEERIQQLKEWRHTHGNLQIPr-qEAQYGLGEFVSKCRRLYNKKD-------------------------------- 427 Thalassiosira p...
XP_002286501 358 RVPWEQRFQELCRWKEEHGHANVPr--HSGGKLGEWVHIQRGLWRKKDan------------------------------ 405 Thalassiosira p...
EED92077     268 lqhshspkrrkrkrsprfshLDD---EKEALLEGLGF 301 Thalassiosira pseudonana CCMP1335
EEC50462     336 ------------------ikVNP---ERLQLLKELDF 351 Phaeodactylum tricornutum CCAP 1055/1
EEH58449     340 ------------------gtLSA---KKIEALEKLGF 355 Micromonas pusilla CCMP1545
XP_002286169 129 ------------------klkNT---GTVNKLNEIGF 144 Thalassiosira pseudonana CCMP1335
EED90083     201 ---------------gqttpLTV---GRMRELEKMGF 219 Thalassiosira pseudonana CCMP1335
XP_002180716 254 -----------------pnvMVK---ERMEKLEEMGF 270 Phaeodactylum tricornutum CCAP 1055/1
XP_002296684 637 ----------------grvcLDA---VKMQRLTEIGF 654 Thalassiosira pseudonana CCMP1335
XP_002184270 128 ------------lrprrsapLTD---DRIELLNELGF 149 Phaeodactylum tricornutum CCAP 1055/1
XP_002286505 428 ---------------------VAfmnTRAPTLESIGF 443 Thalassiosira pseudonana CCMP1335
XP_002286501 406 ------------------flL-----KKAPMLDSIGF 419 Thalassiosira pseudonana CCMP1335
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap