Conserved Protein Domain Family
Paralemmin

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pfam03285: Paralemmin 
Paralemmin
Statistics
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PSSM-Id: 397401
Aligned: 24 rows
Threshold Bit Score: 259.707
Threshold Setting Gi: 301615954
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_001191828   67 RRQSEEDEFRVKQLEDNIQRLEQEIQALESEE---------SQISAKEQIIL---------EKLKET---------EKSF 119  dog
XP_023366242   67 RRQSEEDEFRVKQLEDNIQRLEQEIQMLESEE---------SQISAKEQIIL---------EKLKET---------EKSF 119  small-eared g...
XP_015218281   80 RRQSEEDELQVKKLEDNIHRLEGEIYQLEREE---------SQISAKEQVLR---------EKLRET---------EKSF 132  spotted gar
6_pfamImport    1 RRQLEQDEAKARSLEEAINRLEKEVVGLENSShhiyqiavlSYISDNSD---------------YSN---------QITV 56  
XP_029684024   62 aldqdQDQARTRSLEETITRLENELLHLEAGG---------VSSG----------------------------------- 97   torafugu
XP_023194851   67 RSQLEEDEARSRTLEESIRRLEQEVSSLETGP---------VSQTITHSVVMstpdpavevKGHSRMelggakpsgQVIQ 137  southern plat...
XP_022525412   74 KKQLQEDEAKTKGLEEAILRMEQELEELETGV---------SATS-TKENLS---------DVAQQE---------ETKA 125  Mexican tetra
XP_025764851   81 RKQLEQDEEQGKRLEDMIHRLESEIGALESEE---------SQISAKEQVLR---------ERLKET---------ERSI 133  Nile tilapia
XP_007497950   67 KRQSEEDEFKVKKLEDNIHRLEQEIQTLESEE---------SQISAKEQIIL---------EKLKET---------EKSF 119  gray short-ta...
NP_001191136   67 RRQTEEDEFKVRTFEDNIHRLEQEIEKLESEE---------SQISAKEKLIL---------EKLKET---------EKSL 119  platypus
NP_001191828  120 KDL------------------------QKSF----------SNADGdavnyissqlpD--LPIL------CSRTAEPSPg 157  dog
XP_023366242  120 KDF------------------------QKGF----------SNTDG---------------------------------- 131  small-eared g...
XP_015218281  133 EDL------------------------QKSL----------LKQDGdavnyiysqipD--FPEH------YSQRPEVASg 170  spotted gar
6_pfamImport   57 IRL------------------------QQSY----------YSGAF-----------AevKVH-------KTSRKNKAKe 84  
XP_029684024   98 --TlpavevkgrddfeddapipevnvnKSLMmktpneveqlKR------------------------------------- 138  torafugu
XP_023194851  138 DPA------------------------EVKV----------HKSLK-------------------------VSKSREAR- 157  southern plat...
XP_022525412  126 V-D------------------------NKVV----------GETIK--------------VIR----------------- 139  Mexican tetra
XP_025764851  134 EDL------------------------QKSL----------MSQDEdatgcmsaplsdcmdpdpnhlalatqhqtgppal 179  Nile tilapia
XP_007497950  120 KDF------------------------QKSF----------SNTDG---------------------------------- 131  gray short-ta...
NP_001191136  120 EDF------------------------QKSF----------SNKDGdavnhicsqlpdlpkly--------trtaepspg 157  platypus
NP_001191828  158 qdGTSRAaAVYAMEINVEKDKQTGETKILSTSTIGPEGVHQ-RGVKVYDDGTKVVYEVhsgG----TVVENGVHRLSSKD 232  dog
XP_023366242  132 --------AVYAMEINVEKDKQTGETKILSASPIGPEGIRQ-KGVKVYDDGTKVVYEVhsgG----TIVENGVHKLSAKE 198  small-eared g...
XP_015218281  171 dgRNPRKtAMYAMEINVEKDRQTGETKILSTSAVSPEDVHQ-RGVKVYDDGRKVVYEVrsgGa---PTLENGVHPWSSTD 246  spotted gar
6_pfamImport   85 atDEMKR-AMYSVEITVERDKVTGETRVLSTNTTLLAVLDRiRDVNDNNQNTSVVHEMngeD---------GVQPLSSSE 154 
XP_029684024  139 --------AMYSVEITVERDRVTGETRVLSTNTILPVDLSH-QGVVVYEDERKVVHEMngeD---------GVQPLSSSE 200  torafugu
XP_023194851  158 --GEMKK-AMYSVEIKVERDRVTGETRVLSTNTKLPVDLSD-QGVKVYEDEQKVVH-----E----MNGDDA-HLLSSVE 223  southern plat...
XP_022525412  140 -------------EIK--------EVKV----HVSPRLEKS-RG--DSDMMRAVVHEV--------GAVANGVHQLSSSE 183  Mexican tetra
XP_025764851  180 genarprpAMFAMEINVQHDPRTGEQRILSANRVNPLDAAS-RGVKVYDDGRKVVYEVtssGgvstTTVENG---WSSEQ 255  Nile tilapia
XP_007497950  132 --------AVYAMEINVEKDKQTGGTEILSPATIGPEGVHQ-RGAKVYDDGTKVVYEVhsgG----TVVENGVHTFSSKD 198  gray short-ta...
NP_001191136  158 rdgtssvaAVYAMEINVEKDKQTGETRILSTSTIGPEGVHQ-KGVKVYDDGTKVVYELhsgG----TVVENGVHKLSSKD 232  platypus
NP_001191828  233 VEELIQKAGqssfrgghvser-------------------------tgiadgslshpkEHMLcKEAKLEMV--------- 278  dog
XP_023366242  199 VEELIQKAGqsclggghvser-------------------------tvtadgsfshpkEHMLcKEAKLEMV--------- 244  small-eared g...
XP_015218281  247 VDELMQRVGqsqtkgdsgsprv------------------------lattsggypgpkEQMVhKEAKLEMV--------- 293  spotted gar
6_pfamImport  155 VEELISKAD-------------------------------------------------QTSVtPQAAAAATppptavtpp 185 
XP_029684024  201 VEQLIHKAD-------------------------------------------------EAFMmSPTSSMAAspptvevq- 230  torafugu
XP_023194851  224 VEELIHKAD-------------------------------------------------EASVmSHPITTAAslptgevlr 254  southern plat...
XP_022525412  184 VEELIHKAD-------------------------------------------------EITY-SDGEGTTPkrvaesetv 213  Mexican tetra
XP_025764851  256 VDQLIQRAArpvvrggdggrsqvtvtpaapqtyvspadvddlsppscappsipssppaQVTLqRETHLGMM--------- 326  Nile tilapia
XP_007497950  199 VEELLQKAGqsntkgkqearaaw---------------------ertviadgrlshtkEQMLcKEAKLEMV--------- 248  gray short-ta...
NP_001191136  233 VDELIQKAGqssikgghdrksgs---------------------ertviadgnlsrakEQMLcKEAKLEMV--------- 282  platypus
NP_001191828  279 ------------------HKSR-KDHSSGTPGQQAQAPsTEGP-EANLDQPVTMIFMGYQNIEDEEETKKVLGYDE-TIK 337  dog
XP_023366242  245 ------------------HKSR-KDHSPGNPGQQAQAPsTEGP-EANLDQPVTMIFMGYQNIEDEEETKKVLGYDE-TIK 303  small-eared g...
XP_015218281  294 ------------------RNPHgRLVAG---DPKYGDEvTEVP-VATSEKPVTMIFMGYHNVEDEEETKKLLGFDG-TIK 350  spotted gar
6_pfamImport  186 pt------vlvqeevrpeSRP--AEVTGLETQEGGAPSvA----GASAENPVTMVFMGYQSVEDEDETKKILGLKG-TVK 252 
XP_029684024  231 -----------eeaapqlMPPVpVEATRLET----SVDlQLSAaEASDENPVTMVFMGYQNVEDEDETKKVLGLQE-MVK 294  torafugu
XP_023194851  255 esdlppepepgstrtpshAPAVaAEITGLEAAAGEELDvA----EASAENPVTMVFMGYQDVEDEDETRKVLGLQG-TVK 329  southern plat...
XP_022525412  214 ---------avavpaegePTPi-KEITGVEAKPPATTP-QPEVnEASTENPVTMVFMGYQNVEDEDETKKVLGMEStTVK 282  Mexican tetra
XP_025764851  327 ------------------PPSSpAVTTQPTSSGQPGTElTSPP-QASVEHPVTMVFLGYQDVEDMSESRQLLGFDG-AVK 386  Nile tilapia
XP_007497950  249 ------------------HKSW-KDHSAESPEQQAKVPrAEVPaDASLDQPVTMIFMGYQNIEGEEEAKKVLGYDE-TIK 308  gray short-ta...
NP_001191136  283 ------------------QKPR-KDLIE-KAESEAKISgAKVR-EASLDQPVTMIFMGYQNIEDEEETKKVLGYDE-TIK 340  platypus
NP_001191828  338 AELVLIDEDDEKslrEKTVtdvstidgnaaelvsgRLIS-----------------DTTEPS-----SPEGKE---ESLA 392  dog
XP_023366242  304 AELVLIDEDDEKslrEKTVtdvstidgnaaelvsgRPIS-----------------DTTEPS-----SPEGKE---ESLA 358  small-eared g...
XP_015218281  351 AEIVLIDEDDEKslrEKTVtdistmdgnaadlvsgRPLS-----------------DTTEL------SSESKD---ESSA 404  spotted gar
6_pfamImport  253 AELVLLHDANGK---TSPGegreeag---gphapdPP-P-----------------AAAPPPaaspaTPPSTKpteTSAA 308 
XP_029684024  295 AELVLINDA------TTPSdegkeeisllppalprPPKP-----------------VEAEPP-------AEAApepEQPR 344  torafugu
XP_023194851  330 AELVLIDDGDGK---VDPPac------------aaPPSA-----------------APPTPTk----APETVRasnGEAA 373  southern plat...
XP_022525412  283 AELVVIEDGENKsaqSAQSeake--------eqeaPPNG-----------------GPAEPV-----KDQEASgeaGEPE 332  Mexican tetra
XP_025764851  387 AEVVLIDEDDEKslrEKTVtdisvidgtaadlvsgRPVTseavstelssdgrepdsTSSPPA-----NPEANT---VPPP 458  Nile tilapia
XP_007497950  309 AELVLIDEDDEKslrEKTVtdvstidgnaaelvsgKPIS-----------------DTTEPS-----SPEVKE---ESLA 363  gray short-ta...
NP_001191136  341 AELVLIDEDDEKslrEKTVtdvstidgnaaelvsgRPIS-----------------DTTEPS-----SPEGKE---ESLS 395  platypus
NP_001191828  393 TEPAP-GTQkKKRCQCCVVM 411  dog
XP_023366242  359 TEPAP-GLGwESAQLKREES 377  small-eared galago
XP_015218281  405 KEAQPaGPEdVFSGLLTAEN 424  spotted gar
6_pfamImport  309 SM--------KQPCKCCSIM 320 
XP_029684024  345 AGATElKKE-KRLCICCSIM 363  torafugu
XP_023194851  374 AEGRAaAGKkKQPCKCCSIM 393  southern platyfish
XP_022525412  333 SGAGEvKGKeKQPCKCCSIM 352  Mexican tetra
XP_025764851  459 GLTPAtvynqtsgvtlttan 478  Nile tilapia
XP_007497950  364 TDPVP-GSQwdgdqktlapl 382  gray short-tailed opossum
NP_001191136  396 IEPVP-GTQkKKRCQCCVVM 414  platypus
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