3B4N


Conserved Protein Domain Family
Pectate_lyase

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pfam03211: Pectate_lyase 
Pectate lyase
Statistics
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PSSM-Id: 397360
Aligned: 82 rows
Threshold Bit Score: 190.089
Threshold Setting Gi: 81706587
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3B4N_A              109 AGPLRAAK---------AS-SECKPGATFENR-TVDCGGVTIg---tSCPNDSDKq--KPLIILKN-ATVKNLRISAS-G 170
jgi:Amir_2563        31 GSTFPSPN---------GS-QGVGAKIKVSG--SYDGGLKRFyg-tgDLGNGGQDegqSPLFELANgATLSNVVLGSP-A 96  Actinosy...
O34310               18 SQFQPSTVf--------AAdKVVHETIIVPKNtTYDGKGQRFva-gkELGDGSQSenqDPVFRVEDgATLKNVVLGAP-A 87  Bacillus...
Q65EF5               19 GQALPEKA---------LAaEVVHKTIVVEKGqTYDGKGKRLia-gpELGDGSQRedqKPIFKVEDgATLKNVVLGAP-A 87  Bacillus...
WP_013369567         25 fvgnySAH---------AApEVVHKTILVKAGeVYDGKGKTVvadpdTLGDGSQKeaqKPIFKLENnATLKNVIIAAP-A 94  Paenibac...
zhongguo:PM3016_378  19 VFAALPAQ---------AAtITVNSTIVVAAGqTFDGAGNTYvanasTLGDGSQAegqKPVFRVEAgGTLKNVNLGAP-A 88  Paenibac...
Q7C4I5              215 AGSTEQA----------GKiNVVKDTIKVGAGeVFDGHGATFta-dkSMGNGDQGenqKPMFELAEgATLKNVNLGEN-E 282 Pseudomo...
tigr:CJA_2413       106 SSTSSTST---------GGsAECKAGATIENK-TVDCGGKTIg---lSCPGDAEGq--PPVITLKN-ATIKNVRIAASgG 169 Cellvibr...
Q6D881              102 SNAASTAPaplraaplkAAsPECKAGAVIKDK-TVDCGGITLg---lSCKGDGDDq--PPVITLEN-ATIKNLRISEKgG 174 Pectobac...
WP_013318842        100 SNAVTTAPnagp-lraaKAsSECKPGATFENR-TVDCGGVTIg---tSCPNDSDKq--KPLIILKN-ATVKNLRISASgG 171 Dickeya ...
3B4N_A              171 gADGIHCdSG----NCTIENVIWEDICEDAATNNg------kTMTIVGGIAH--------NAkdgyggkPDKVLQHNSkN 232
jgi:Amir_2563        97 -ADGVHC-LG----ACTLNNVWWEDVGEDAATLKgss--ssqKMTVNGGGAR--------KA-------SDKVFQHNG-P 152 Actinosy...
O34310               88 -ADGVHT-YG----NVNIQNVKWEDVGEDALTVKke-----gKVTIDGGSAQ--------KA-------SDKIFQINK-A 140 Bacillus...
Q65EF5               88 -ADGVHT-YG----NASINNVVWEDVGEDALTVKse-----gSVTINGGSAR--------LA-------ADKIFQINK-A 140 Bacillus...
WP_013369567         95 -ADGVHV-YG----NGTISNVTWEDVGEDALTLKep-----gTVNITGGGAY--------HA-------YDKVFQINA-E 147 Paenibac...
zhongguo:PM3016_378  89 -ADGVHC-YG----SCNITNVNWQDVGEDALTLKss-----gTVNITGGSAY--------KA-------YDKVFQANA-A 141 Paenibac...
Q7C4I5              283 -VDGIHV-KAknaqEVTIDNVHAQNVGEDLITVKgeggaavtNLNIKNSSAK--------GA-------DDKVVQLNA-N 344 Pseudomo...
tigr:CJA_2413       170 -ADGIHCtSG----SCRAENVVWEDICEDAASLIss----gtKFTISGGSAYnntsnspgGK-------PDKIFQHNSkN 233 Cellvibr...
Q6D881              175 -SDGIHCkSG----NCRIENVIWEDVCEDAATNLg------kTMTIVGGVAHnttn-gpgGK-------PDKVLQQNSkN 235 Pectobac...
WP_013318842        172 -ADGIHCdSG----NCTIENVIWEDICEDAATNNg------kTMTIVGGIAHnakd-gygGK-------PDKVLQHNSkN 232 Dickeya ...
3B4N_A              233 STTVVKgN-FTLTgEHGKLWRSCGDCSNNgGPRFLTVTSATVNGtIdSIAGVNRNYGDVATISglKIKNYKEGKppV--C 309
jgi:Amir_2563       153 GTIHIK-N-FQVD-DFGKLYRSCGNCGTQ-YKRNVILENVTAYSpGkVLAGINTNYGDTAKYTnvTIVGDSSKK--IvvC 226 Actinosy...
O34310              141 STFTVK-N-FTAD-NGGKFIRQLGGST---FHVDVIIDKCTITN---MKEAIFRTDSKTSTVRmtNTRYSNVG------- 204 Bacillus...
Q65EF5              141 STFTVK-N-FTAD-QGGKFIRQLGGST---FKAVVNIDNCTITN---MKEAIFRTDSSTSSVTmtNTRYSKVG------- 204 Bacillus...
WP_013369567        148 GTINIK-N-FRAD-DIGKLVRQLGGST---FRVNMTLDNSDISN---VKDSILRSDGPNSKAKitNTRYHNVK------- 211 Paenibac...
zhongguo:PM3016_378 142 GTFNIK-N-FRAN-DIGKLVRQNGGTT---FKVVMNVDSSDISN---VKDSILRTDSPVSTGSitNTRYSSVP------- 205 Paenibac...
Q7C4I5              345 THLKID-N-FKAD-DFGTMVRTNGGKQF--DDMSIELNGIEANH---GKFALVKSDSDDLKLAtgNIAMTDVK------- 409 Pseudomo...
tigr:CJA_2413       234 STFEVI-NgFTAKgVNGKLWRSCGNCSSNgGPRNLVVNNVTVDGtIgSIAGVNRNFGDKATIRnlKIKGYKSGS--PkvC 310 Cellvibr...
Q6D881              236 SHTIVQ-GnFTLTgQHGKLWRSCGDCTNNgGPRNLTIISATVNGtIdSIAGVNRNFGDVAEIRdlRIKNYKAGK--PkiC 312 Pectobac...
WP_013318842        233 STTVVK-GnFTLTgEHGKLWRSCGDCSNNgGPRFLTVTSATVNGtIdSIAGVNRNYGDVATISglKIKNYKEGK--PpvC 309 Dickeya ...
3B4N_A              310 EEFKGVVK 317
jgi:Amir_2563       227 EKYKG--V 232 Actinosynnema mirum DSM 43827
O34310              205 QKWIGVQH 212 Bacillus subtilis subsp. subtilis str. 168
Q65EF5              205 QKWIGVKH 212 Bacillus licheniformis DSM 13 = ATCC 14580
WP_013369567        212 QLFKGFKS 219 Paenibacillus
zhongguo:PM3016_378 206 TLFKGFAS 213 Paenibacillus mucilaginosus 3016
Q7C4I5              410 HAYDKTQA 417 Pseudomonas syringae pv. tomato
tigr:CJA_2413       311 EEFKGVQK 318 Cellvibrio japonicus Ueda107
Q6D881              313 EEFTGVEK 320 Pectobacterium atrosepticum
WP_013318842        310 EEFKGVVK 317 Dickeya dadantii
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