5YLZ,2C77,1XB2,1G7S,5YT0,3J0E,6NOT,2EFG,3JB9,2H5E,3CB4,2YWE,2DCU,1S0U,6QG6,4CRN,3J5Y,3P27,3VMF


Conserved Protein Domain Family
GTP_EFTU_D2
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pfam03144: GTP_EFTU_D2 
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Elongation factor Tu domain 2
Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to pfam03143, and in fact has weak sequence matches to this domain.
Links
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Statistics
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PSSM-Id: 427163
Aligned: 190 rows
Threshold Bit Score: 33.0078
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5YLZ_C  481 AEWSLVRIYSGLLKRGDTVRI---LDTsQSesrq---krqlHDISKTETSNEDEDEDdetpsceveeigllggryvypVH 554  Saccharomyces cerev...
2DCU_A  232 GGVLDGSIVQGKLKVGDEIEIrpgVPYeEHgriky--epitTEIVSLQAGGQFVEEA---------------------YP 288  Pyrococcus furiosus...
1S0U_A  229 GGVLGGAIIQGVFKVGDEIEIrpgIKVtEGnktfw--kpltTKIVSLAAGNTILRKA---------------------HP 285  Methanocaldococcus ...
O96719  244 GGVIGGSLVTGMLRVGDKIEIrpgLVI-RKgnrfv-crpfvSEIVSLKAESIDLSEA---------------------YP 300  Encephalitozoon cun...
Q54XD8  270 GGVAGGSILKGVLKIGDEIEVrpgVIS-KEldgkikcspifCRIISLFAEENELQYA---------------------VP 327  Dictyostelium disco...
O64490  269 GGVAGGSILRGVLRVNQLIEIrpgIVTkDErgnsk-ctpiySRIISLYAEQNELQFA---------------------VP 326  thale cress
Q24208  275 GGVAGGSILSGVLKVGQEIEVrpgVVTkDSdgnit-crpifSRIVSLFAEQNELQYA---------------------VP 332  fruit fly
6QG6_M  335 GGVAGGSILNGVFKLGDEIEIrpgIVTkDDkgkiq-ckpifSNIVSLFAEQNDLKFA---------------------VP 392  baker's yeast
Q9Y9C1  235 GGVVGGSIIQGVFRVGDEIEIspgVAV-RKpggrveyvrlhTTITSLRFGSIEVEEA---------------------RP 292  Aeropyrum pernix K1
O26361  230 GGVIGGSLVQGRLRVGDEIEIrpgIQVkKDgkqtw--mslhSTITGLVAGGEEMEEV---------------------GP 286  Methanothermobacter...

5YLZ_C  555 EAHKGQIVLIKGISSa--YIKSATLY 578  Saccharomyces cerevisiae S288C
2DCU_A  289 GGLVGIGTKLDPYLTkgdLMAGNVVg 314  Pyrococcus furiosus DSM 3638
1S0U_A  286 GGLIGVGTTLDPYLTksdALTGSVVG 311  Methanocaldococcus jannaschii
O96719  301 GGLIGVGTTMDPSFCkadKLVGQVMG 326  Encephalitozoon cuniculi GB-M1
Q54XD8  328 GGLIGVGTKIDPTLCradRLVGQVLG 353  Dictyostelium discoideum
O64490  327 GGLIGVGTTMDPTLTradRLVGQVLG 352  thale cress
Q24208  333 GGLIGVGTKIDPTLCradRLVGQVLG 358  fruit fly
6QG6_M  393 GGLIGVGTKVDPTLCradRLVGQVVG 418  baker's yeast
Q9Y9C1  293 GGLVAIGTQLDPSVTkadNLVGNVVG 318  Aeropyrum pernix K1
O26361  287 GGLVGVGTLLDPALTkadSLSGSVAG 312  Methanothermobacter thermautotrophicus str. Delta H
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