Conserved Protein Domain Family
CagE_TrbE_VirB

?
pfam03135: CagE_TrbE_VirB 
CagE, TrbE, VirB family, component of type IV transporter system
This family includes the Helicobacter pylori protein CagE, which together with other proteins from the cag pathogenicity island (PAI), encodes a type IV transporter secretion system. The precise role of CagE is not known, but studies in animal models have shown that it is essential for pathogenesis in Helicobacter pylori induced gastritis and peptic ulceration. Indeed, the expression of the cag PAI has been shown to be essential for stimulating human gastric epithelial cell apoptosis in vitro. Similar type IV transport systems are also found in other bacteria. This family includes the TrbE and VirB proteins from the respective trb and Vir conjugal transfer systems in Agrobacterium tumefaciens. homologs of VirB proteins from other species are also members of this family, e.g. VirB from Brucella suis.
Statistics
?
PSSM-Id: 367350
Aligned: 11 rows
Threshold Bit Score: 191.402
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
zhongguo:SL003B_p0041 186 TSERGGfRVARYDELFQFIRFCIT-GENH-PVRLPEIpmYLDWLVTAel-qhGLTPLVENR---------------FLGI 247 
Q9ZE45                196 LGVRQT-QSGIYCEILEFLSSLINcGDSPgPIALPRG--TIDEYLPT-----HRLFFDSRT---------------IEVR 252  Ricke...
Q9ZCG4                184 LGIIFE-NDNVFSNTLFLYNRIANlNDNDcLVPIIDL--S-DALGR------SIYTISGDKi--------------IVTD 239  Ricke...
Q2YIT8                186 LSTYEDkHGALCSQQLEFYNFLLS-GEWQ-KVRVPSC--PLDEYLGT-----GWVYAGTET---------------IEIR 241  Bruce...
Q48252                327 LKEYTK-DGVIYSKQCEFYNFLVG--MNEaPFICNRKdlYLKEKMHGg---vKEVYFANKHg--------------KILN 386  Helic...
WP_011798706          218 VSEEG--REVTHDDFLSWLQFCVT-GLHH-PVMLPSNpmYLDAVIGGqelwgGVVPKIGRK---------------FIQV 278  Burkh...
O25189                196 LSGLFV-EKIDANSLLNFYAEYIN-GVPS-EYTFARGr-LHDGMIN------SDVHFKKDF---------------FTHI 250  Helic...
O25206                215 LKEFKP-TLLNSKEVLNFYAEYIN-GKYI-AFNPKLKr-LSDSYIA------SNVHFKKDY---------------FVIE 269  Helic...
O24862                177 LKNYAP-KLLSSKEVLNFYAEYIN-GFDL-PLKPLVGgyLSDSYIA------SSITFEKDY---------------FIQE 232  Helic...
P17794                174 LGIREK-QDVLFTEVGEALRLIMT-GRFT-PVPVVSG--SLGASIYT-----DRVICGKRG---------------LEIR 228  Agrob...
Q5ZW33                183 LGKQDE--ALGFSELLQFLGLVVNaGQTI-SFKHPVYspPIANSIPQsfrqeAKYPEGHLGqylsscqllfgeciqFQGN 259  Legio...
zhongguo:SL003B_p0041 248 VAIDglpaESWPGILNSLDLmPLTYRWSSRFVFLDAEEARAKLERTRKKWQQKVRPFFDqlFQTQSRSVDQDAMLMVAET 327 
Q9ZE45                253 SPLG----KKYAGIISILEY-GPNTSAGIFDGFLQMPFEFVMTQSFVFANRTVAIGKMKl-QQNRMIQSGDKATSQIVEI 326  Ricke...
Q9ZCG4                240 HAKN----NKFVSLLSIKEY--QETPSNTLDKFLQLPIELIITEIFYFVSKKQIISKLHg--QDHILKITNDSILLNYKG 311  Ricke...
Q2YIT8                242 TANA----TRYARGIDFKDY-ANHTEPGILNGLMYSDYEYVITQSFSFMTKRDGKEFLTr-QKQRLQNTEDGSASQIMEM 315  Bruce...
Q48252                387 DDLS----EKYFSAIEISEY-APKSQSDLFDKINALDSEFIFMHAYSPKNSQVLKDKLA--FTSRRIIISGGSKEQGMTL 459  Helic...
WP_011798706          279 VAIEgfplESTPGVLSALAElPSEYRWSSRFIFMDQHESLKHLDKFRKKWKQKIRGFFDqvFNTNTGSINQDAAAMVGDA 358  Burkh...
O25189                251 HNGK----EIFKRFISIKTYdIDKIVSTALSSVLHLSLEFDVILNIDNIPKAKAEKRIE---TKRKRAN-KSIRVEIDEL 322  Helic...
O25206                270 FQNQ----NTFCACVGIKAYeSEEISSLPISTLLHTQIELDLIFHIRSLGQFESLNFLK---TKKKLTLSKIVKADIDNY 342  Helic...
O24862                233 SFNQ----KTYNRLIGIKAYeSERITSIAIGALLYQETPLDIIFSIEPMSVHKTLSFLK---ERAKFSMSNLVKNELLEY 305  Helic...
P17794                229 TPKD----SYVGSIYSFREY-PATTRPGMLNVLLSLDFPLVLTQSFSFLTRSQAHSKLSl-KSSQMLSSGDKAVTQISKL 302  Agrob...
Q5ZW33                260 TQKD----CVFGAMLSLKKY-PTNTASILLDSMLSLDCEFIATHTFAPIGRDSALNMISk-KRSKLLSAEDKALSQTTAL 333  Legio...
zhongguo:SL003B_p0041 328 EDAIAEASSQLVAYGYYTPVIVLFDEQQARLQEKCEAVRRLIQAEGFGARIETLNATDAFLGSLPGVSYANIR 400 
Q9ZE45                327 NTALDMATSGDIGFGDHHLSLLCSAKNIKALEDILSMAAVELSNSGIQPVREKVNMEPSYWGQLPGNMDYIVR 399  Rickettsia p...
Q9ZCG4                312 INKLDETN-LDFQFCNQQISIAVIEEDESKLAKAVAKASTELFKLGIIHVKEDINIEQIFWSQLPANFSFIRR 383  Rickettsia p...
Q2YIT8                316 DIAIDQLGRGDFVMGEYHYSLLVFAEDMETVRHNTSHAMNILQDNGFLATVIATATDAAFYAQLPCNWRYRPR 388  Brucella abo...
Q48252                460 GCLSELVGNGDITLGSYGNSLVLFADSFEKMKQSVKECVSSLNAKGFLANAATFSMENYFFAKHCSFITLPFI 532  Helicobacter...
WP_011798706          359 EAAIAEVNSGLVAAGYYTSVVVLMDEDRERLAASALLVEKAVNRLAFAARIETINTLDAYLGSLPGHGVENVR 431  Burkholderiales
O25189                323 NDMIKTDRVLMQEISLN---ILVHAKTKTDLDSACIEITNLLKQKGIVSTQESIGMLPMFFSFFPNRNRLNFR 392  Helicobacter...
O25206                343 IELVQANRLSMQECALN---LVIRAKSKAKLDKSLKEILSLLNNAGLGSVTETIGLKPSYFSFFPNNANINPR 412  Helicobacter...
O24862                306 QELVKTKRLSMQKFALN---ILIKAPSLENLDAQTSLVLGLLFKENLVGVIETFGLKGGYFSFFPERIHLNHR 375  Helicobacter...
P17794                303 SEAEDALASNEFVLGAHHVSLCIYANDLNNLADRGARARTRLADAGAVVVQEGIGMEAAYWSQLPGNYKWRTR 375  Agrobacteriu...
Q5ZW33                334 SDLEDGIASETLLLGAHHHTVMLLAPNKPLLDTAILEATKRYGASGIVVVKETLGQEPAFWSQLPCNQHFITR 406  Legionella p...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap