Conserved Protein Domain Family
DDE_Tnp_IS66

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pfam03050: DDE_Tnp_IS66 
Transposase IS66 family
Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.
Statistics
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PSSM-Id: 397261
Aligned: 68 rows
Threshold Bit Score: 157.806
Threshold Setting Gi: 118194074
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012203342     184 KGLFSEGLLAWVITSKYVDGLPLYRQAALLGRF-GGsDLSRNTMAASVVRVGQAVQP-VINLLRDRVLDAPLIFGDETEI 261 Delftia aci...
Q8TQW2           162 pVQYGPNILASAVYCKNHHFIPYERISEFFEDImGI-KICPATIIRAEKECFQNLEK-FESIIRERLLASPVIHCDETGM 239 Methanosarc...
Q3ASS1            74 YISYGARLKAYTVGLVQGHFISLARVTEIVSDQyGV-KPSDGSVQRWISQASKNLTT-TYTAIGETISNSAVAHFDESGI 151 Chlorobium ...
Q5KUN9           175 HVQYGPRLTALVVYLHHIQLIPYKRLSDTIEALyQH-SISTGTLANMVKRGREALES-NMDVIEDALLESNILHVDETSL 252 Geobacillus...
Q5QL55           173 hVQYGPVITSLLLYWNHAQLIPCERITEMVKTLfHH-PISAGTVVNMTRRWQPVLEA-AIEEIEAALLTSSTLHVDETSL 250 Geobacillus...
Q2J5E9           168 RLVWGPRMLARAVWLVCAHHLPIRRAAAVLTVMvGA-TVSAGWAGGVRARAARLLENtFLPHVRALIAAAPVAHADETTA 246 Frankia cas...
Q2RS17           154 GTPFGPGIRSLLLYLHHSHPVGFERLSRMLQELfGL-AISEGAIANAFRRSQAGLDQ-ARAAIKAKLLTARIIASDETTT 231 Rhodospiril...
Q1D4X0           158 TSAFGPRLSAVVGLLTGVYHLSRRSAVRLLGDVlGI-DISLGAVSAVEARVSEAVKP-AVDEAWSRVLLAPVKHTDGTQW 235 Myxococcus ...
mpitm:STAUR_7870  12 ghTFGERLTGIIVLLSGQYRLSKRKVQDALSDLlGV-RICLGSISNREAEVAKALEV-PVAQVGDAIREAERAHADETGW 89  Stigmatella...
mpitm:STAUR_6722 161 rSAFGDRLGALASLLVGKYRLSKRLVKDALSDMlGV-ELSVGSVVNLEEEMADALEP-AVLQATQYVQAADTVHADETGW 238 Stigmatella...
WP_012203342     262 QVLKeagrsAQSKSYMWAQMTDGsgasgtgppIRLFAYSP---SRS-TEAA-QRLYVG----VRegGVLMSDGYEVYNKI 332 Delftia aci...
Q8TQW2           240 Ki-------EGKRHWLHVASNDK---------YTCYFPHS---KRG-SEAI-NAM--GilpeFK--GVAVHDGWKPYNTY 294 Methanosarc...
Q3ASS1           152 Ra-------QGKTQWLHVAATTE---------AVYYTAHA---KRG-QEAM-SAA--GilplFN--GVAVHDHWKPYFRF 206 Chlorobium ...
Q5KUN9           253 Ri-------KGKLAWVHVACTSK---------YTYLAPHA---SRG-KKAT-DDI--GilprYQ--GTMMHDGFGTYPKY 307 Geobacillus...
Q5QL55           251 Rv-------KGTKQWVHVASTSK---------ETRYGIHR---SRG-KQAT-DDI--GilprYK--GTMVHDAYSVYPMY 305 Geobacillus...
Q2J5E9           247 Ra-------DGALRYVHVAATDY---------LTALHT-G---DRT-AETI-DAG--GiwpaFT--GVLMRDGYQGYTHL 300 Frankia cas...
Q2RS17           232 Rv-------DGVTQWQWVFISDQ---------AVLHEIAP---RRA-KSVA-ETVLNGhr-----peIWVSDRYAGQQ-- 283 Rhodospiril...
Q1D4X0           236 Le-------AGLARTLWTIASSM---------ATVFKILAdskSRTlAPLFgQKL-----------GVLVSDRATALNFW 288 Myxococcus ...
mpitm:STAUR_7870  90 FEGKvn--gRAKRAWLWVVVTAH---------LALFRISP---SRG-SEVA-KALLGEd---FT--GFLTTDRWSAYNWY 148 Stigmatella...
mpitm:STAUR_6722 239 VEGReq--gRGKRAWLWVVATAL---------VALFHIAT---SRG-GKVA-RALLGEd---FT--GFLVSDRWSGYAWY 297 Stigmatella...
WP_012203342     333 AlanKLVH--IGCWAHCRRYFNDALQAlpkanrgpeQLAARFIAL-IGTLYR-------VEALAkeqrL-------DVNA 395 Delftia aci...
Q8TQW2           295 ----DCDH--ALCNAHLQRELTGIEENy-------kQQWAKEMNElLTEMKK-------YTDECke-qLke----lDFEQ 349 Methanosarc...
Q3ASS1           207 D---HVLH--SLCGAHLLRELNAFD-----------ETLQHRWPVqLKQVLIdaknavaQAKKA---------------K 255 Chlorobium ...
Q5KUN9           308 T---QATH--ALCHAHHLRELKGFIEQg--------HTWASRMTTfLLAAKQ-------AVEAH----Hga---lsE-KE 359 Geobacillus...
Q5QL55           306 T---QASH--ALCHAHHLRELREYTELy-------qHSWSNKMAEaLLEMKQ-------AVEKAgg---------aLPEE 357 Geobacillus...
Q2J5E9           301 T---RALH--AWCGAHTLRDLRSIHDGdr-----ggQVWADAMATtLLDAHH-------AACDAr---DaganalaP-EA 359 Frankia cas...
Q2RS17           284 ----DLARvhQVCLAHVLRDVQYAIDSg-------dTVVAPKIRDhLRWAIRvgkrrsdLKNS----------------T 336 Rhodospiril...
Q1D4X0           289 A---MEAR--QVCWAHLLRKAVSFSERdg-----paGAIGRELLDyIGILFD-------YWGRL----Rsge--lqR-DT 344 Myxococcus ...
mpitm:STAUR_7870 149 D---TFLR--QLCWSHLTRDFQSFIDRgg-----egGRLGALLMKeRDRMFK-------GWRRVr--dGt-----mPREE 204 Stigmatella...
mpitm:STAUR_6722 298 D---AGLR--QVCWAHLTRDFQGFIDRgg-----tgGRLGKKLMHqRNLFFT-------WYHRVr--dGt-----mTRQD 353 Stigmatella...
WP_012203342     396 LLQSRQTHSVPVLQEIQALLL----ANV--------HAVLPGSLLGKALHYLSSQWVKLERFVTSGHYPIDNNGCENSIR 463 Delftia aci...
Q8TQW2           350 IKALEERFDAAVMKGIEENPL----ALNpek--qgkRGKKPKTKARNLLDRFIEHKEKILRFLTDLKVPFENNQAERDIR 423 Methanosarc...
Q3ASS1           256 QTSLPPEQIADLKQRYEQWLNygllIFSerpkinkqQGKGKQHPARNLLCRLRDFKDSVLRFIERFDVPFDNNTAERAVR 335 Chlorobium ...
Q5KUN9           360 AKRWERVYDRILAKAQHRl----------------eTMTPLPKKALAFVRRLQKRKEEALRFLREAHVPFDNNQAERDLR 423 Geobacillus...
Q5QL55           358 KVRYWEAVYDELLSNGRRELD----ERCr------qGSHLGVRKAENFIRRLEKRKQEALLFLRKKEVPFDNNQAERDLR 427 Geobacillus...
Q2J5E9           360 VALIRNHYRGALARGETDnh--------------gdRSSLAHD-ARTLIRRMRREEDMILRFVVDLTVPFSNNQAERDVR 424 Frankia cas...
Q2RS17           337 LAAYAAKAERRLDALVGH--------------------PTAHPAGRLLQRQIKAWRAKFFVFLTDRGVPPTNNVSEREIR 396 Rhodospiril...
Q1D4X0           345 LRERMASVRTQVEALLER------------------AVAARLPHVSGSCEDILQHRAALWTFVDREGVEPTNNHAERELR 406 Myxococcus ...
mpitm:STAUR_7870 205 FELRMPKVERRVGRLLRD------------------AVVCAEDKTAGTAAEILKLESAMWTFVHVEGLEPTNNFGERTIR 266 Stigmatella...
mpitm:STAUR_6722 354 FEKRMPEVEREVGRLLRR------------------SAARAEKKTAGMAREILQWEKCLWTFVDVPGLEPTNNFGERCLR 415 Stigmatella...
WP_012203342     464 PFVIGRRNW-LFADTVAG--A 481 Delftia acidovorans
Q8TQW2           424 MMKLQQKIS-GTFRTIQGaeA 443 Methanosarcina acetivorans
Q3ASS1           336 PVKVKLKVA-GGFRAMGGaeA 355 Chlorobium chlorochromatii CaD3
Q5KUN9           424 MVKVKENIS-GTFREETFaqS 443 Geobacillus kaustophilus
Q5QL55           428 MVKVKQKIS-GTFRQEDDaea 447 Geobacillus kaustophilus
Q2J5E9           425 PVKVQQRTSgGCWRTLAGlvD 445 Frankia casuarinae
Q2RS17           397 PSVVFRKVT-NGFRSDWGaqI 416 Rhodospirillum rubrum ATCC 11170
Q1D4X0           407 AFVLWRKRS-FGTQSPRGnlF 426 Myxococcus xanthus DK 1622
mpitm:STAUR_7870 267 HAVMYRKTS-FGTQSPEGsrf 286 Stigmatella aurantiaca DW4/3-1
mpitm:STAUR_6722 416 HAVMYRKTS-FGTQGPQGsrf 435 Stigmatella aurantiaca DW4/3-1
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