3NDB,1QZW,2JQE


Conserved Protein Domain Family
SRP_SPB

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pfam02978: SRP_SPB 
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Signal peptide binding domain
Statistics
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PSSM-Id: 397225
Aligned: 776 rows
Threshold Bit Score: 66.2655
Threshold Setting Gi: 121909036
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3NDB_B                        324 KFTLNELMTQLEAIENMGSMKKILSM----IP-----------GFggampkelsHltE--AKIKKYKVIISSMTKEE-RE 385 Methanocaldococcus jannaschii...
EFJ49763                      331 nvTMSVLKDMFESVLELGPMSQMMSM----LPgfns----dllpKgn------dKqsQ--MMIRRYITIIESMTDKE-MN 393 Volvox carteri f. nagariensis...
A0CHL2                        326 KFSIRDLQTQFNSVLKLGSLNQFMSA----IPgmgs----svlsKgn------eKesI--KRIQRFLCIMNSMTADE-LD 388 Paramecium tetraurelia...
EGR33903                      326 QFSIRDFQSQFKSILKLGSISQFMSM----IPglgn----sfldKnn------eKesI--KKVKKFLCIMDSMNDLE-LD 388 Ichthyophthirius multifiliis...
WGS:AAGF:cds.TTHERM_00343500A 326 QFSIRDFQAQYKSILKLGSINQFMSM----IPgmgn----sildKnn------eKesI--RKVKKFLTIMDSMNDNE-LD 388 Tetrahymena thermophila SB210...
XP_001011062                  325 QFTLRALQQNYKSILKMGSLNQFMSM----IPgmqn----iiqgQis------eKeqI--NKIKKSLTIMDSMSNDE-LD 387 Tetrahymena thermophila SB210...
A0C5I7                        318 QFTLRDLESEVKKLLKFGSINYFFSKclmgIPs----------iNvn------eKeqT--QQMKRYLYILNSMTSKE-LD 378 Paramecium tetraurelia...
XP_650715                     327 tLTVRDWKEQLSNLQKMGQLGNIMQMiglnHPm--------------------fQggNieKKFKVFMVILDSMTDRElDG 386 Entamoeba histolytica HM-1:IMSS...
EFJ34601                      325 niSFKFLCDQIENITSMGSLSQLMSM----IPgf--------nnInv------qSfdI--QQFRKYRVILDSMTNEE-RN 383 Selaginella moellendorffii...
KAE9138301                    327 vFTLRDMYKQFQSVMKMGPLSKVMSM----IPglpqgmsemmnVGgg------eEeaS--KRLRRFLFMMDSMTDAE-LD 393 Phytophthora fragariae...
3NDB_B                        386 NPKiIk--A--SRIRRIARGSGTTENDVREVLRYYETTKN 421 Methanocaldococcus jannaschii
EFJ49763                      394 TTN-IkilqepSRVNRLARGSGSTPQQVLALLESYKHYSK 432 Volvox carteri f. nagariensis
A0CHL2                        389 GEGnLn----fCRIVRIAKGSGTSIEEVHILLDEHKKLSK 424 Paramecium tetraurelia
EGR33903                      389 GDGkIs----eKRIVKIAYGSGNSIEEVHSLLEEYKRLSK 424 Ichthyophthirius multifiliis
WGS:AAGF:cds.TTHERM_00343500A 389 GVVaIn----pSRIVRIARGSGSSLEDVNQLLDEYKKISK 424 Tetrahymena thermophila SB210
XP_001011062                  388 GITqIt----qKQLFRISKGSGQPIENVKLLIDEQKTFAK 423 Tetrahymena thermophila SB210
A0C5I7                        379 GQVsVvvtLsnSRIIRIAKGSGTTIEQVNNLLKIYKSFIK 418 Paramecium tetraurelia
XP_650715                     387 SAKtMl--NdeSRIRRLARGSGRDIREVNELFEQIKLFQQ 424 Entamoeba histolytica HM-1:IMSS
EFJ34601                      384 SSSlSe-----SRILRLAKGSGTSVDNVQQMVNHVKTMSK 418 Selaginella moellendorffii
KAE9138301                    394 GVVpLs----eSRQTRVARGSGCQLYEVEFLLKCHKQFAT 429 Phytophthora fragariae
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