1CR5,5G4G


Conserved Protein Domain Family
CDC48_2

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pfam02933: CDC48_2 
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Cell division protein 48 (CDC48), domain 2
This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the C-terminus. The VAT-N domain found in AAA ATPases pfam00004 is a substrate 185-residue recognition domain.
Statistics
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PSSM-Id: 397194
Aligned: 78 rows
Threshold Bit Score: 35.2935
Threshold Setting Gi: 6226660
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1CR5_C       112 VFDQDeLAkQFVRCYESQIFSPTQYLIMEF-QGHFFDLKIRNVQAIDlgd--iepTS--AVATGIETKGi--lTKQTQI 183 baker's yeast
Q9M0Y8       118 QVDAAlLStQLKRKYTNQVLTVGQKATFEY-HGTNYILTVNRA------------DVegQDHTNGIERGl--lSKDTYI 181 thale cress
Q0CQ92       177 PYDQDeLGaAVIKNFQSQIFAPQQLILMDY-KGVKLQLKVKTVQRVDlgse-kggAAg-RVETDKTARGi--lTQHSQV 250 Aspergillus terr...
Q5B8N2       180 LYDQDeLLnSVIKNFESQIFAPGQPVLMDH-HGVPLQLTVKTILRVSlts--ekdTSk-VPETEPTARGi--lTKHTLI 252 Aspergillus nidu...
XP_001271245 213 PYDQDdLSnAVIRTFENQIFAPGQKILMDH-KSIPLLLTVKTVQRIGlts--ekaPAg-RVETDPTARGi--lTRHTQI 285 Aspergillus clav...
EHA23160      95 PYDQDeLAsVVIKNFENQIFAPGQKILMDH-RSIPLLLTVKTVQRVDlssetasgGSv-ETDPTARGIL----TRHSQI 167 Aspergillus nige...
Q6C470       177 SFEPEkLAhHFLHQYANQIFTPGQTLAMDF-EGLNFQIRVLSTSVVNl------gDAggVAARNVRGIL----VRHTDI 244 Yarrowia lipolytica
Q17KM8       111 PYDSDqMAkDFVLQFSGLALTVGQPLVFSFqDKKLLGLCIKSLEAIDasas-vqgDKk-QEPKR-TNFGr--lLGNTSV 184 yellow fever mos...
Q9P7Q4       163 PFDGEeMAkLFCSSYQSQVFSPGQKIVFDF-RSYNIKATVRTISCVDlli--genQDa-ENTADTSKRGl--lTSQTEI 235 Schizosaccharomy...
Q5KEU7       226 IFDSEeMAaAFINAFPSLPLTPLQPLVFDY-RGHELKATVRAISTLDg-------QDg-RTGVTMEGTEiiwvKDPTSG 295 Cryptococcus neo...
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