1VBH,2N5T


Conserved Protein Domain Family
PEP-utilizers_C

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pfam02896: PEP-utilizers_C 
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PEP-utilising enzyme, TIM barrel domain
Statistics
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PSSM-Id: 397163
Aligned: 14 rows
Threshold Bit Score: 355.847
Threshold Setting Gi: 74834929
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1VBH_A              520 LSGDLGTFMAWVDDVRKLKVLANADTPDDALTARNNGAQGIGLCRTEHMFFASDErIKAVRQmimaptlelrqqaldrll 599 Zea mays
Q24801              517 GSGYFGTILKWANEIKKIGVFANADLPSAAKKALEFGAEGIGLCRTERMFNAVER-LPIVVKmilsntleerkkylnelm 595 Entamoeb...
P42850              498 EGGQVVVAGAPLVTGTMVKV--NVSMPEVAERAAATGADGVGLLRAEHMILSIGQhPIKFIKegkee----------elv 565 Pyrococc...
P32670              364 QQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTS-APGESE------------------ 424 Escheric...
Q6MTX2              253 QLKKFKDKPSLTKDKIKKLIEANIGSTNDIQSVLDSGAEGIGLFRTEFLYMNNDH-FPTEEE------------------ 313 Mycoplas...
P45595              254 EWALLKDAETVTADGKHFELAANIGTPKDVEGVNNNGAEAVGLYRTEFLYMDSQD-FPTEDE------------------ 314 Streptoc...
Q5L199              253 EWAKLVDQPTVTADGVHVELAANIGTPDDVKGALANGAEGIGLYRTEFLYMGRSE-LPTEDE------------------ 313 Geobacil...
P45597              523 REAAQRALPAETTDGHHIDIGANVNLPEQVAMALTQGAEGVGLMRTEFLFLERGS-TPTEDE------------------ 583 Xanthomo...
rhodo:RCAP_rcc02543 520 lEARERYKPALTVDGARVEVVANISDVAEAIASVEAGAEGVGLLRTEFLFVNREA-PPGEDE------------------ 580 Rhodobac...
P37177              418 LAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSG-FPSEEE------------------ 478 Escheric...
1VBH_A              600 pyQRSDFEGIFRAMDGLPVTIRLLDPPLH--EFLPEGniedivselcae-----tganqedalariEKLSEVNPMLGFRG 672 Zea mays
Q24801              596 plQKQDFIGLLKTMNGLPVTVRLLDPPLH--EFLPTLeelmreifemklsgkteglaekevvlkkvKELMEVNPMIGHRG 673 Entamoeb...
P42850              566 ekLAEGIEKVAAAFYPRPVWYRTLDAPTNefREMPGGe----------------------------DEPEERNPMLGWRG 617 Pyrococc...
P32670              425 --LYNIFCQALESANGRSIIVRTMDIGGD--KPVDYL-----------------------------NIPAEANPFLGYRA 471 Escheric...
Q6MTX2              314 --QFEAYKKVVSQIN-HLVVFRTLDIGGD--KKLSYF-----------------------------KFDEEMNPFLGYRA 359 Mycoplas...
P45595              315 --QYEAYKAVLEGMNGKPVVVRTMDIGGD--KELPYF-----------------------------DLPKEMNPFLGFRA 361 Streptoc...
Q5L199              314 --QFAAYKTVLEQMGGKPVVVRTLDIGGD--KELPYL-----------------------------HLPKEMNPFLGFRA 360 Geobacil...
P45597              584 --QYQTYLAMARALDGRPLIVRALDIGGD--KQVAHL-----------------------------ELPHEENPFLGVRG 630 Xanthomo...
rhodo:RCAP_rcc02543 581 --QLAIYAAMLSALNGLPIIIRTLDVGGD--KEIPYL-----------------------------RMPVEQNPFLGERG 627 Rhodobac...
P37177              479 --QVAQYQGMLQMFNDKPVTLRTLDVGAD--KQLPYM-----------------------------PIS-EENPCLGWRG 524 Escheric...
1VBH_A              673 CRLGISY--PELTEMQARAIFEAAI--AMtnqgvqvFPEIMVPLVGTPQELGH-QVTLIRQVAEKVFAN-VGKTIGYKVG 746 Zea mays
Q24801              674 IRLGTTN--PEIYEMQIRAFLEATA--EVikegiktHAEIMIPNVTEVNELINlRKNVLEPVHEEVEKK-YGIKVPFMYG 748 Entamoeb...
P42850              618 IRRGLDQ--PELLRAEFKAIKKVVEkgYN-------NIGVMLPLVSHPEQIRE-AKRIAREVg-------LEPHKDVAWG 680 Pyrococc...
P32670              472 VRIYEEY--ASLFTTQLRSILRASA--HG-------SLKIMIPMISSMEEILW-VKEKLAEAKQQLRNEhIPFDEKIQLG 539 Escheric...
Q6MTX2              360 IRFTLDR--KDIFKDQIRALLKASA--FG-------KLGIMFPMIATIDEFKQ-AKAFVEECKIELDKEgIKYDKQVQIG 427 Mycoplas...
P45595              362 LRISISEtgNQMFRTQLRALLRASV--HG-------QLRIMFPMVALLNEFRK-AKGILEEEKANLKAEgVAVSDDIQVG 431 Streptoc...
Q5L199              361 IRLCLEM--QDMFRTQLRALLRASV--HG-------NLKIMFPMIATLDEFRQ-AKAILLEEKEALLRQgVPVADGIEVG 428 Geobacil...
P45597              631 ARLLLRR--PDLLEPQLRALYRAAKd-GA-------RLSIMFPMITSVPELIS-LREICARIRAELD------APELPIG 693 Xanthomo...
rhodo:RCAP_rcc02543 628 IRFCLSH--EDLFRTQLRAIYRASA--GG-------QVRIMFPMIAMIEELET-ARRIAEEVRLEVGAA------PVEIG 689 Rhodobac...
P37177              525 IRITLDQ--PEIFLIQVRAMLRANAa-TG-------NLNILLPMVTSLDEVDE-ARRLIERAGREVEEMiGYEIPKPRIG 593 Escheric...
1VBH_A              747 TMIEIPRAALVADEIAEQ-AEFFSFGTNDLTQMTFGYSRDDVGkf-iPVYLaqgilqHDPFEVLDQRGVGELVKFATERG 824 Zea mays
Q24801              749 TMVECVRAALTADKIATE-ASFFSFGTNDLTQGTFSYSREDSEnkfiPKYVelkilpANPFEILDRPGVGEVMRIAVTKG 827 Entamoeb...
P42850              681 VMIEVPAAAIIIEDLIKEgIDFVSFGTNDLTQYTLAIDRDNER----VAKL------YDETHPAVLKLIKHVIKVCKRYG 750 Pyrococc...
P32670              540 IMLEVPSVMFIIDQCCEE-IDFFSIGSNDLTQYLLAVDRDNAK----VTRH------YNSLNPAFLRALDYAVQAVHRQG 608 Escheric...
Q6MTX2              428 MMVEIPSAAILADQFAKY-ADFFSIGTNDLIQYSFASDRMNQN----VSYL------YQPLNPSLLRLIQLTISGAHKHN 496 Mycoplas...
P45595              432 IMIEIPAAAMLADQFAKE-VDFFSIGTNDLIQYTMAADRMNEQ----VSYL------YQPYNPSILRLVDHVVKAAHAEG 500 Streptoc...
Q5L199              429 MMVEIPAAAVMADQFARE-VDFFSIGTNDLIQYTMAADRMNER----VSYL------YQPYNPAILRLISYVIDAAHREG 497 Geobacil...
P45597              694 IMIEVPAAAAQADVLARH-ADFFSIGTNDLTQYVLAIDRQNPE----LAAE------ADSLHPAVLRMIRSTIDGARKHD 762 Xanthomo...
rhodo:RCAP_rcc02543 690 IMIEIPSAVMMAPELAKR-VDFFSIGTNDLTQYALAMDRMHPV----LAKQ------ADGLHPAVLRLIDSTVRAAEAAR 758 Rhodobac...
P37177              594 IMLEVPSMVFMLPHLAKR-VDFISVGTNDLTQYILAVDRNNTR----VANI------YDSLHPAMLRALAMIAREAEIHG 662 Escheric...
1VBH_A              825 rkarpnLKVGICGEHGGEPSSVAFFAKAGLDYVSCSPFRVPIARLAAAQVL 875 Zea mays
Q24801              828 rqtrpeLLVGICGEHGGEPSSIEWCHMIGLNYVSCSSYRIPVARIAAAQAQ 878 Entamoeba histolytica
P42850              751 ------VETSICGQAGSDPKMARILVRLGIDSISANPDAVQLIRQVVAQEE 795 Pyrococcus furiosus DSM 3638
P32670              609 ------KWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMAQLD 653 Escherichia coli K-12
Q6MTX2              497 ------KWVGMCGEMAGDSKALPILLGLDLDAFSMSATSVLKARSLMSKIe 541 Mycoplasma mycoides subsp. mycoides SC
P45595              501 ------KWAGMCGEMAGDQTAVPLLVGIGLDEFSMSATSVLRTRSLMKKLD 545 Streptococcus mutans UA159
Q5L199              498 ------KWVGMCGEMAGDPIAIPILLALGLDEFSMSATSILPARAQLKRLs 542 Geobacillus kaustophilus
P45597              763 ------RWVGVCGGLAGDPFGASLLAGLGVQELSMTPNDIPAVKARLRGRA 807 Xanthomonas campestris pv. campestris...
rhodo:RCAP_rcc02543 759 ------IWVGACGGIAGDPVGAAVLSGLGVRELSVSIPAVAGIKAQLRHSA 803 Rhodobacter capsulatus SB 1003
P37177              663 ------IDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARAKYLLRRID 707 Escherichia coli K-12
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