Conserved Protein Domain Family
CBM_5_12

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pfam02839: CBM_5_12 
Carbohydrate binding domain
This short domain is found in many different glycosyl hydrolase enzymes and is presumed to have a carbohydrate binding function. The domain has six aromatic groups that may be important for binding.
Statistics
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PSSM-Id: 397122
Aligned: 39 rows
Threshold Bit Score: 30.2661
Threshold Setting Gi: 500024196
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6LUV1        356 HDD--ISYRAvVAHVAQGDWAPSStssLW 382  Photobacterium profundum
Q24UU5        179 YNG--KAFYN-RYYANHGEVPGSMn-nPW 203  Desulfitobacterium hafniense Y51
Q2WA42         30 FNG--NTYRC-IVATTAGQSPTSTp-aSW 54   Magnetospirillum magneticum AMB-1
Q08RQ9        509 HDG--QLYRA-RSANTNKIPPANLs--VW 532  Stigmatella aurantiaca DW4/3-1
Q7VJR0        411 SEG--KIYRR---INQAGNNPINEg--NW 432  Helicobacter hepaticus
Q7M8B2        462 HNG--ILYKR-TGASGASDPYTDSa--NW 485  Wolinella succinogenes
WP_011768462  670 HNG--KSYKC-TTAINSGEEFTAL---KW 692  Psychromonas ingrahamii
Q8ED31        900 YQG--KLYSA-KQDVPAGTLPTNAt--YW 923  Shewanella oneidensis
WP_011794916   46 HLGthKVYQS-AQDGNVGKDPTTTl-gFW 72   Acidovorax citrulli
Q12EX9         73 HDG--SLWHC-NYKTACRPGDGP----AW 94   Polaromonas sp. JS666
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