Conserved Protein Domain Family
YitT_membrane

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pfam02588: YitT_membrane 
Uncharacterized 5xTM membrane BCR, YitT family COG1284
This is probably a bacterial ABC transporter permease (personal obs:Yeats C).
Statistics
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PSSM-Id: 396924
Aligned: 58 rows
Threshold Bit Score: 144.55
Threshold Setting Gi: 81627276
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ASM65079       15 DYAYITLGLISYSLGWAAFLLPYQITTGGTTGISAIIYYST---------GFPIQWSYFIINAVLMTFAI-RILGP-RFS 83  Bacteroides ca...
jgi:Cphy_2185  12 VILLNVVGIFLYTVGMRSFAAPAKIAPGGASGIAILVNYVT---------GFPIGVFCTLFSLPLLAIVWkKKIFKpVFV 82  Lachnoclostrid...
WP_012199065   43 DILVEVIGSFLIAISLYNFAVQAKFPMTGFSGIALILNRLF---------SLPIGITTIVLNIPVALVCY-RLLGK-GFF 111 Lachnoclostrid...
WP_004847540   19 dLFYDIAGAVLFAAGVYTFAENADFAPGGITGISLLLNHVF---------GIPVGTLTLFINLPLIVISY-RTLGK-RFL 87  [Ruminococcus]...
EDN79089       28 dISYDIVGSVLYALGIYTFAKTADFAPGGLSGLALIMNHLW---------RFPIGITTLALNIPLIILSF-KLVGR-RFM 96  [Ruminococcus]...
WP_006426602    8 NLCMILLGNTVYALAIVMFILPNDMITGGTTGLGIAIHHYF---------GLPIHTFVLIFNTLMFLLGA-AVLGM-KFA 76  Dorea longicatena
Q8DWP5          7 NFILLNIGSLIVAFGFNAFFLHNHIVTGGISGLAVSFHEVF---------GWDSAFFIMIINIPLLLLCY-FGLGK-QTF 75  Streptococcus ...
Q65EC7         16 DYGYILFGSAVVAVTFNMFLLPNRIAAGGVSGISTILQSFG----------FEAAYVQWAFNIPLFIAGV-LVLGG-KFG 83  Bacillus liche...
Q5KV98         18 EYAYVLIGAAIVAVAFNVFLLPNRIASGGVSGISTIMHALF---------GIEPAYVQWALNIPLFIAGV-VLLGR-QFG 86  Geobacillus ka...
wustl:BD1980   20 DYSLIVVGSFLQALSYVLFLAPYKIVPGGVYGISIVIHYVTkdlfpffpdGLPMGATALCFNIPLMILAM-KKIGL-SSG 97  Parabacteroide...
ASM65079       84 IKTTYAIFMLTFLLWLFqllVNNYVEVPDMtadgkplllgpgqdFMACIIGAAMCGVGLGIVFNYNGSTGGTDIIAAIVN 163 Bacteroides ca...
jgi:Cphy_2185  83 GKAVCSILLLSLMTDLLe--PILPHYQGNP--------------LLAALFAGAFLGVGQGMVYLGTSDTGGITLIGLILQ 146 Lachnoclostrid...
WP_012199065  112 LRSLRCMIISSLMIDYVg--PLLPLYEGDR--------------LLAAICTGVLGGLGYAMIYMRNSSTGGADFIIMAVK 175 Lachnoclostrid...
WP_004847540   88 LKTAKSMVITTFFLDVVf--PVFPMYEGQR--------------MMAALCSGALMGAGMVMFYMRGSSSGGLDFVIMPIK 151 [Ruminococcus]...
EDN79089       97 FKSARTMIVCTIFLDLIf--PYTKPYTGEP--------------FMAALFSGVCLGAALALFYMRGSSSGGTDFLTMSIK 160 [Ruminococcus]...
WP_006426602   77 LTTLVSTFYYPVILGVLeqiPALQNVTDDK--------------MLSTICGGLMIGMGIGIVIRCGASTGGMDIPPLVLN 142 Dorea longicatena
Q8DWP5         76 LKTVYGSWIFPVFIKLT---QSVPTLTHNP--------------LLAALFGGVIVGCGLGIVFWSDSSTGGTGIIIQFLG 138 Streptococcus ...
Q65EC7         84 IKTLVGSVFLPFVVYVT---RDIAPATENP--------------LLAAIFGGVGIGVGIGMVFLGRGSTGGTALAAQIIH 146 Bacillus liche...
Q5KV98         87 VKTFVGTVFLPLVVYLT---KGMEPATTNP--------------LLGAIFGGIGVGLGLGVVFRGRASTGGTDLAAQIIH 149 Geobacillus ka...
wustl:BD1980   98 PKTIVTFLLISIFTDSLsyfLTDPLVENDA--------------FIAAFYGGAILGLGVTCIFRAQSTSAGTDVLARVIA 163 Parabacteroide...
ASM65079      164 KYK-DVTLGRMIMICDVFIISSCYFIFhDWRRVIFGFVTLFIIGVVLDWIINSAR-QSVQFFI--FSKKYDEIADRII 237 Bacteroides caccae
jgi:Cphy_2185 147 KKFpQLHVGTVSSAINCIIVLASGIVYrNIESILYAIVTVYVAGLFMNKLINSANaKGLIIVMseCTD----RIRCIF 220 Lachnoclostridiu...
WP_012199065  176 AIRpHLSLGKIVFLTDVGIVLAGGIIFrDMDGIIYGMIINYLFAIAVDKLMYGIN-SGKVALI--VTHHGELITDTIE 250 Lachnoclostridiu...
WP_004847540  152 KKRpHLSVGKITMIIDLGIILLGWPVFgDVDAALYGLVSTFASVVVIDKVLYGLG-AGTLAFV--VTEKGDEVAAKIa 226 [Ruminococcus] t...
EDN79089      161 AIKpHLSIGFVTMAIDLLIILLGWPVFgNVDAVLYGLISAFVTSVVIDKIMYGMG-AGKLILI--ITTKADEVSKKId 235 [Ruminococcus] g...
WP_006426602  143 KKF-GLPVSVMLYVFDFIILISQMLFT-NKEEIVYGILLVLIYTVILDKVLLMGS-TRTKVEI--MTEKYEELNRLIq 215 Dorea longicatena
Q8DWP5        139 KYT-PISLGQGVILIDGLVTIVGFLAF-DSDTVMFSIIGLITISYIINAIQTGFT-TLSTVLI--VSQEHQKIKTYIn 211 Streptococcus ag...
Q65EC7        147 KYT-GLSQGKCLALIDGTIVLSAMFVF-NIEQGLYAMLGVYISSKTIDVIQVGLN-RSKMAMI--ITNREEEVRHAVL 219 Bacillus licheni...
Q5KV98        150 KYT-GLSLGMCVIFIDGLIVLTAAFVF-DIERALYALIALYVTSKTIDLVQVGLG-YSKIALI--ITNEEEKVRRAIL 222 Geobacillus kaus...
wustl:BD1980  164 NDS-NLKVSNMIIVLDSAVVLLGLIVFkDWAVPLYSWFTIFVYGKIVEMFQTEN--PNRAVFI--VSRKTQELKTLIV 236 Parabacteroides ...
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