1W3S


Conserved Protein Domain Family
RecO_C

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pfam02565: RecO_C 
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Recombination protein O C terminal
Recombination protein O (RecO) is involved in DNA repair and pfam00470 pathway recombination.
Statistics
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PSSM-Id: 396905
Aligned: 94 rows
Threshold Bit Score: 63.1943
Threshold Setting Gi: 81597331
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1W3S_B        83 LAEPERYAFAHLMAEFADALFQEGEFSEQAFDLFAASLRGVAHQp-DPEWVALV-MSYKLLGLAGVIPQTARCARCGAPD 160 Deinococcus rad...
Q11PX3        85 PFDIHKTSISIFLSELLLKTLKEESDNQELFDFLFHSLHALDKIekNVLNFHVS-FMLRYSFYLGFFPQETKSVWEN--- 160 Cytophaga hutch...
WP_008203408  85 PFDFNRTGLALFMTEIVSRSIFENYQNEHLFDFLSMSILVLDQKdtSLKHFPLV-FLMEQAKYLGFAPDSASGFLMENR- 162 Algoriphagus ma...
Q5LIK3        85 PYDPFKSAIALFLAEFLYRAIREEAENRPLFAYLQHSILWLDTCkiSFANFHLV-FLMRLSRFLGLYPNLDDYHAGDYFD 163 Bacteroides fra...
Q7MTF5        87 QSDPVRNSIALFLAEFLYLILRLPEADTNLYDFVAFSIDKLEEMdgPMANFHLA-FLFRLLVPLGLIPDLQFGGSVIPRW 165 Porphyromonas g...
WP_015481839  87 YSNIVKQSVVLFLSEVLSNAIQEEEQNTTLYEYLETALQWLDLHd-NVANFHLL-FLLNLTGFLGFYPDLSDHTKNGFDL 164 Polaribacter sp...
EAP87589      86 HTDLLKSTVIMFLAELLRNAIQEEEKNPELFGFLETAFLWFDKYn-S-SNFHLL-FLVKLSLFLGFYPEGTNKNASFFNL 162 Croceibacter at...
WP_013306082  86 HSDISKNAITLFLSEMLANSIQEEERNEGLFYYMESALQWLDANt-EANNFHIY-FLIDLTKYLGFYPDTTSTEGLYFDL 163 Maribacter sp. ...
EAR16785      86 HSDIRKGAIALFLSEVLSESIREEETNPELFSYLEHTLQWLDQHq-RIANFHIR-FLMGLTRYLGFYPDQTDSHAPYFDL 163 Robiginitalea b...
B3EKJ8        84 EPSMERFSAIYRLIEILKISTGNEEKNIRLFNALERTLEKLCAPc-RNADAAVAwFMLKLISESGFEPSIEQCVTTGKSI 162 Chlorobium phae...
1W3S_B       161 PEHPDPLG---------------GQLLCSKCAALPPYPPAVLDFLRHAVRR-TVRA--SFEQPVPSADRPALWRALEKFV 222 Deinococcus rad...
Q11PX3       161 -----------------------------------SLYKPSAEIITYLENCmKYTY--FESFSSTNVHRREALDIVIAFY 203 Cytophaga hutch...
WP_008203408 163 ---------------------------------GQPFSPEEYLIVKEFLEQ-LMQYsyHCDTQVTLAIRRKLIDHLLEFY 208 Algoriphagus ma...
Q5LIK3       164 MLNATF-------------------TSVRPQLHSSYIQPDEAGRLLQLMRM-NYET--MHLFGMNRTERARCLAIINEYY 221 Bacteroides fra...
Q7MTF5       166 FDPADGR------------------FVPNAPAHGRGIPPHQSTYLQLFSRI-TFDN--MKAFRLSRAERRQVLDYLVDYY 224 Porphyromonas g...
WP_015481839 165 LEGVY----------------------SDNFANKNVIHKNDFYQFKKLLGI-NFDE--IQEVSFSKEERQVVLQIIIQYF 219 Polaribacter sp...
EAP87589     163 LDGTF----------------------QEVSTNSYCISGIHKDTLELLLGI-NFDG--LEELKLNQTNRSGMLSMLLLYY 217 Croceibacter at...
WP_013306082 164 LEAEF----------------------TNNLTLSPNIKGENLNYFKRFLGI-NFDT--LNKIKMKKANRQELLQSLVLYF 218 Maribacter sp. ...
EAR16785     164 SEGAY----------------------CSKPGLNPVLADGNLEAFRNILGT-NFDA--IHTVELTQAERRELLNSLILYY 218 Robiginitalea b...
B3EKJ8       163 LPMLQEGSaddlcltydpggvslPVPAAQKGPPGQRLPVQVYLLMRTLNRL-DIRS--IDEIDIPADNSRLLCDILQNYC 239 Chlorobium phae...
1W3S_B       223 TVQVG--GVHSWR 233 Deinococcus radiodurans R1
Q11PX3       204 KNQIEsfGDMHSI 216 Cytophaga hutchinsonii ATCC 33406
WP_008203408 209 SQQLEsnATWKSM 221 Algoriphagus machipongonensis
Q5LIK3       222 RLHLPdfPILKSL 234 Bacteroides fragilis NCTC 9343
Q7MTF5       225 RFHLPpfPLLKTP 237 Porphyromonas gingivalis W83
WP_015481839 220 KLHLGnfRNPKSL 232 Polaribacter sp. MED152
EAP87589     218 ELHLQgfRKPKSL 230 Croceibacter atlanticus HTCC2559
WP_013306082 219 ELHLQgfRKPRSL 231 Maribacter sp. HTCC2170
EAR16785     219 EIHLQgfKKPRSL 231 Robiginitalea biformata HTCC2501
B3EKJ8       240 SLHNNynPSSKNR 252 Chlorobium phaeobacteroides BS1
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