Conserved Protein Domain Family
Poly_export

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pfam02563: Poly_export 
Polysaccharide biosynthesis/export protein
This is a family of periplasmic proteins involved in polysaccharide biosynthesis and/or export.
Statistics
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PSSM-Id: 396904
Aligned: 589 rows
Threshold Bit Score: 40.6355
Threshold Setting Gi: 343955565
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Fleli_0307  52 EQNYRLAPFDYITIQVFTndgeiiidpsgdFsEEITdgggvithnqnqfetdvsgipiatgntgvggtgrvggflRRYLI 131 Bernardetia l...
CCJ07849        67 SAGYKIGPQDVLEVTVFK------------V-PELSk---------------------------------------sVQV 94  Methylocystis...
jgi:Snov_3224   83 SEGYRVGPLDVLDITVFK------------V-EDLSk---------------------------------------iVQV 110 Starkeya nove...
WP_013418083    81 SNTYKIGPLDVVDITVFN------------V-PELSk---------------------------------------tVQV 108 Rhodomicrobiu...
jgi:Rvan_0470   50 SKSYKVGPLDVLEITVFK------------V-ADLSk---------------------------------------tVQV 77  Rhodomicrobiu...
zuci:PHZ_c1149  64 AADYRIGAQDVLEVNVFG------------I-EELKr---------------------------------------eVQV 91  Phenylobacter...
Q1GSS1          68 ERPYLIGPFDRLTIDVFG------------I-LELSk--------------------------------------REVQT 96  Sphingopyxis ...
WP_012050989    63 ERPYIVGPFDKLAIDVFG------------I-DELSn--------------------------------------RKAQV 91  Sphingomonas
BAK66823        67 QVPYYVGAFDSLTIDVFG------------I-QELSn--------------------------------------RAVQV 95  Sphingobium s...
jgi:Thimo_0980  61 VSVYRIAPDDLLSITVFQ------------V-EELSs---------------------------------------eQRV 88  Thioflavicocc...
jgi:Fleli_0307 132 QETGQILLPMIGKTQLAGLTLYQADSLLTKKFskFY----EePYIIT 174 Bernardetia litoralis DSM 6794
CCJ07849        95 TENGMVNLPLIGEVSVSGKTANGLERDLEGRL--GAky-vKsPQVSV 138 Methylocystis sp. SC2
jgi:Snov_3224  111 SENGRFNFPLVGDVQAGGRTVSEIEKDLAAKL--GGny-lRnPQVTV 154 Starkeya novella DSM 506
WP_013418083   109 SEAGTINFPLIGEFQAGGKTGREIERELSLKL--GDky-lQnPQITV 152 Rhodomicrobium vannielii
jgi:Rvan_0470   78 SEAGTINYPLVGEMQAGGRSAREIEQDLTTLL--GAky-lQkPQITV 121 Rhodomicrobium vannielii ATCC 17100
zuci:PHZ_c1149  92 NAGGKVILPLVGELQAGGRTPGEFSEDVEAAL--KAky-mKdPQVIV 135 Phenylobacterium zucineum HLK1
Q1GSS1          97 DASGRFSFPLAGVIQAAGKTPAEVEQYLRSKLmqAHi---RdPQVTV 140 Sphingopyxis alaskensis
WP_012050989    92 DASGRISFPLVGVVNVAGLTPGEIEVVLQQKL---AtnyvRnPQVTV 135 Sphingomonas
BAK66823        96 DASGRISFPLAGIVDVSGLTPAEVEGELATRLrrAHv---RePQVTV 139 Sphingobium sp. SYK-6
jgi:Thimo_0980  89 LASGEIYMPLVGAIEVAGLTPDEAQRRIAAKL--EKny-lQnPQVRV 132 Thioflavicoccus mobilis 8321
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