Conserved Protein Domain Family
Transposase_20

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pfam02371: Transposase_20 
Transposase IS116/IS110/IS902 family
Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.
Statistics
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PSSM-Id: 426743
Aligned: 74 rows
Threshold Bit Score: 60.6474
Created: 19-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q24RK2        285 ELLDGIPGIGFLTAATLIAEIGDFrLFKSAKALTAFFGLDPSVNQSGKFQGdRNKISKRGTRigRRILFTIAMASIrttr 364 Desulfitobacte...
Q9JYF9        190 qVAEQIKGIGSITTATLMAMLPEL-GRLSHKRIASLVGIAPHPRKSGEAKF--KSRCFGGRSavLKALYMATVAATr--- 263 Neisseria meni...
jgi:Swit_2487 196 RALRSIPGVAAVLAPLLIATMPEL-GSLNRRQAASLAGCAPHPRDSGKLQA--RRHSSGGRRqiRPALFIAALAAAr--- 269 Sphingomonas w...
Q53W20        192 EVLMALPGVGPQVAAAVLALLPPe-LWGRAKRAASYAGLIPEREESGKSVE-RSRLSKKGPPllRRKLYMGALVAVr--- 266 Thermus thermo...
Q7VZ91        211 ELLNSIPAIGPQAGNAILAVMHNr-HIDSAQSLAAYLGVVPVQRQSGSSLNsCARLSKAGPSqvRATLYMAALVGTr--- 286 Bordetella per...
WP_013318784  201 KLLKSIDGVGDQIGWNMLATIRGS-NFRRAEQVAAYLGVIPVERRSGTSVRgRARLSKIGPPaiRAKLYMGAIAAIs--- 276 Dickeya dadantii
jgi:Haur_5206 206 TLLLSIPGIGLHATAWLLVSTLNFtLCATPEAAVAYAGLNPLARESGTSIRgRPRVGRGGNArlRTVLYMATLSASr--- 282 Herpetosiphon ...
Q2S605        190 SLLETIPGVGLQTAAIVVSELGAPeQFENARQAAAYAGLVPRHRESGTSVRgKPQMSKVGNGrlRRAMYFPAMTALr--- 266 Salinibacter r...
Q9JY46        192 KRLKTITGIGEQATAVLLSTY-KRhEFKNARQFTAYLGLDPRKFQSGTSVNgKSRISKIGSSeiRKSLYMPALVAYr--- 267 Neisseria meni...
Q9JRT9        191 RNLQTIPSIGKDTASVLYAQL-TEkHFKTANQFVSYAGLNPAIIQSGTSVRgRGRLSRYGNRrlKSTLYMPALCAYr--- 266 Neisseria meni...
Q24RK2        365 kgdeiNPVLREFYA 378 Desulfitobacterium hafniense Y51
Q9JYF9        264 ----fEPLIRDFHQ 273 Neisseria meningitidis serogroup B
jgi:Swit_2487 270 ----gKNPLADFYN 279 Sphingomonas wittichii RW1
Q53W20        267 ----hDPEMRAFYH 276 Thermus thermophilus HB8
Q7VZ91        287 ----hNPHIRALYQ 296 Bordetella pertussis
WP_013318784  277 ----hNRHVKAQYE 286 Dickeya dadantii
jgi:Haur_5206 283 ----yNPPIQALYT 292 Herpetosiphon aurantiacus DSM 785
Q2S605        267 ----fNSAAGAFGN 276 Salinibacter ruber DSM 13855
Q9JY46        268 ----cNA-FPEFVG 276 Neisseria meningitidis serogroup B
Q9JRT9        267 ----fNA-FPKLIN 275 Neisseria meningitidis serogroup B
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