Conserved Protein Domain Family
TerD

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pfam02342: TerD 
TerD domain
The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.
Statistics
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PSSM-Id: 426730
Aligned: 211 rows
Threshold Bit Score: 153.425
Created: 19-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:PCC7418_3410   1 MGIQLTTGQRFSLKK-QAPGLNALLCGLGWELAPRkglkklFKPDFDLDISVLCLNEEGKLQknTDvVYYGNLTHPSGAI 79  Halothece s...
jgi:Thivi_1844     1 MGTELQQGANAPIAD------KSVMIGVGWD----------ADIPWDIDVSAFLMGASGKVRsdQDfVFYNQTETPCGSL 64  Thiocystis ...
jgi:Thimo_3694     2 tSVALQPGANTSLSA-APSRPTRVIIAVGWTPSSP--------AGLEIDASAFLLGPNGKVRgdDDlVFYNNPRTADGSV 72  Thioflavico...
Q2RW02             2 tvVTLTPGANTTIAD-C----AQIMVAVGWDPKSP--------PGMEIDASAFIIKADGKVVndEHfVFYGAQASPDGSV 68  Rhodospiril...
Q891Y5            79 asMKILKGQKISLNQ-KSPNISKLMVALEWEIKNT------SNKKLELDTSIFMVDKN-NTTqeEDfIFYSNLKSAQGGI 150 Clostridium...
tigr:NT01CX0671   85 ssIKLKRGQKIALNK-GSNKLSKLVVSLEWDINYS------GSHEFDLDTSIFMLDIN-KNTaeDKfIFYGNPKSIENSV 156 Clostridium...
jgi:Dtox_2988    250 sipvLKKGQRIELSQ-FNPGDKKIFVGIGWDNRLA--------APIEIDAVAFILGGNKKIIrdEDlIFYGNRSSSDGSI 320 Desulfofarc...
CDE50611         114 MLMPVARGQKTALRL-QERGCTRIRFGFGWHTNDS---------RCDVDASAFLLGESGRVLsdEGfVFYGQQTSSDGSV 183 Faecalibact...
CDA24375          71 linpVQKGQKIAIENqGK--LSKVYAKLGWNVTNS---------NCDVDVSAFMLNNSGCVIgdSWfVFYGQETSPDNST 139 Roseburia s...
CDE55011          66 llnpVAKGQKIPLSS-FS--AEGLDVRLGWNVKNS---------VCDIDVSAFLLSSQGKVPgdDWfVFYGQPQSPDHSV 133 Roseburia s...
jgi:PCC7418_3410  80 SHLGDNLTGEhttpnatekheEEEDDeeitdkEQILVTLPQVPKRVKKLVIVANIYEps--arRQNLGQVENAYVRLVDL 157 Halothece s...
jgi:Thivi_1844    65 CLESDHE----------------SDQ------RAFRALLARVPEDVSKIVFTITIGAnsgaddCPHCGMIEQLYIRVTNL 122 Thiocystis ...
jgi:Thimo_3694    73 ATTPAPT----------------GDQ------QAFLVEFAKIAGAIEKIAFCVTIHEge--arRQSFGTLQSAWIRALDA 128 Thioflavico...
Q2RW02            69 RFVASPMAGNp------------GDV------QAFGIDLAKLAGTIDAIDICVTIHEgq--arRQSFASLKGVFARILDL 128 Rhodospiril...
Q891Y5           151 VLKSDHNSNL-----------KDGYD------EVVQLDLTKIPLNIEKLAFTVTIYEae--drGETFENISNAYFRLIDT 211 Clostridium...
tigr:NT01CX0671  157 VLGEDFNLKL-----------KDYYD------ERIMIDLDLVPDNIEKLAITVTIYDge--krGQNFSSISNGIIRIIDS 217 Clostridium...
jgi:Dtox_2988    321 -----SLLGQ-----------GKGLQ------EKISIDLSRLPQQYERIVIALAIYEgk--kkQQYFNQLERVYIKVS-D 375 Desulfofarc...
CDE50611         184 RFQPNGA----------------DDR------ETITVDTARIDPRIRKIVFVLTIDEal--tqKLHFGMLQNVYLRILDD 239 Faecalibact...
CDA24375         140 HFSIDNG----------------QDR------EVITIDFNKLNSNVSKIVFVLTINEal--ekHLNFSMLNDAYIRIMND 195 Roseburia s...
CDE55011         134 LFSQINDP---------------WDR------EKIAVHFSRLNPAVEKIVFVLTIHEal--qnHLNFSMVKDACIRIMDS 190 Roseburia s...
jgi:PCC7418_3410 158 EHEVEIARYNLSsDHYCSiETGIILAEIYRqpdNEGQWQVEVVAKGINVGsLQEL 212 Halothece sp. PCC 7418
jgi:Thivi_1844   123 SG-EDLIRFNVT---NVGqERALMLGDLYR---HQGSWKFRAVGQGYNGG-LDAL 169 Thiocystis violascens DSM 198
jgi:Thimo_3694   129 NDGAEIARFDLP-LAGRQ-EVAMIFCEVYR---RNQEWKLRAVGQGFNQG-LAPL 177 Thioflavicoccus mobilis 8321
Q2RW02           129 ATNREIARFDLQ-TAGMA-ETAITLGKVYR---RNDQWKVRAVGQGFAGG-LAPL 177 Rhodospirillum rubrum ATCC 11170
Q891Y5           212 YTKKEILNYKFD-DQLSE-ETAIVVAEIYR---YKGEWKINCIGSGFKGG-LKAL 260 Clostridium tetani
tigr:NT01CX0671  218 LGKDELFSYEFN-EGLKL-ETAVVVAEIYR---HNGQWKLNPVGNGFNGG-LEAL 266 Clostridium novyi NT
jgi:Dtox_2988    376 ESGKPMFYFEV--KDFALmENSLIIAEIYR---YKGKWKLAAVGAGYRDD-LKAL 424 Desulfofarcimen acetoxidans DSM 771
CDE50611         240 RDGREILSYPLG-NAFEN-VTSMTLGELYL---HQGQWKFNPVGNGVHMD-LAGQ 288 Faecalibacterium sp. CAG:74
CDA24375         196 SN-QELVSFKMD-EYYSN-VTSMMIGEIYQ---HNGAWKFAAIGNGVAKD-LAGL 243 Roseburia sp. CAG:197
CDE55011         191 SSGQELVSYRMD-QYYSN-VISMMIGELYK---YKGSWKFHAIGDGVAKD-LKGL 239 Roseburia sp. CAG:303
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