2DPD


Conserved Protein Domain Family
RTP

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pfam02334: RTP 
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Replication terminator protein
The bacterial replication terminator protein (RTP) plays a role in the termination of DNA replication by impeding replication fork movement. Two RTP dimers bind to the two inverted repeat regions at the termination site.
Statistics
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PSSM-Id: 426725
Aligned: 9 rows
Threshold Bit Score: 150.226
Created: 19-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DPD_A                 10 GFLVKQRAFLKLYMITMTEQERLYGLKLLEVLRSEFKEIGFKPNHTEVYRSLHELL-DDGILKQIKVKK---EGAKLQEV 85  Bacill...
KMY44514                4 GFLLKQKAFLKLYLLEIAARPKDYGSVVLDDLRAKFKPYGYSPSHTELYKTYKELY-KQGFVKRRSEIKg-dPHENIQEV 81  Bacill...
goetting:BRLA_c023660   8 GFLMKQRAFLKLYLITMVEMKKGYALQMLDILQHDFKNLGYRPNHAEIYRSLDDLV-EDGILYRVKKLQp-nMNSKHKEV 85  Brevib...
WP_046524087            9 GFLIKQRAFLKLYLLTSIEKEPWYGLQLLDELKASFKPYGFVPQHSEVYRALHDLT-EDGILSRKKVKE---NGSKYKEV 84  Bacill...
jgi:Bcoa_3098          11 GFLIKQRAFLKLYIITNIENGRWYGLQLLDELKKEFKPLGFEPQHSEIYRALHELEdEEQILTKIKVKP---DGAKRKEV 87  Bacill...
KEZ54413                9 GFLLKQRAFLKLYMIRMTEQDRLYGLKLLDVLRDEFRIYGYRPNHSEVYKSLHELI-EDGILKQVKRKK---EGMKLQEV 84  Bacill...
KZZ82607                9 GFLLKQRAFLKLYMITLTDQKRLYGLKLLDNMRDEFRRFGYKPNHSEVYKALHELI-DDGVLKQVKKKK---EGMKLQEV 84  Bacill...
OAB76613                2 GFMIAQRAFIKVYLITMVEQQRGYGYQMLEELRKDFSSFGYSPPQSEIYRALHELV-QEGVLYRTKHLKgndPKVDFQEI 80  Paenib...
KKB33397                7 KFLIKQRAFLKLFMIKFVEENKLYGMQAMDELKATFKQYGYEPNHSEIYRSLHELI-DDGILKRQKKLQ---EGAKYKEV 82  Quasib...
2DPD_A                 86 VLYQF-KD--YEAAKLYKKQLKVELDRSKKLIEKALSDNF 122 Bacillus subtilis
KMY44514               82 FIYYL-TEkgKEELEAYRKLMKIEIERSIGILQTALEDHY 120 Bacillus sp. FJAT-27916
goetting:BRLA_c023660  86 VYYHFvSDggYEAAMRYKANVKTDLDRCIKILRKAVADNY 125 Brevibacillus laterosporus LMG 15441
WP_046524087           85 AVYSI-AD--KEEAKAYKKLVKADLDRCEQLLRKALKDNF 121 Bacillaceae
jgi:Bcoa_3098          88 VVYKI-KD--MEKAKAYKKLVKADLERCEQLLRKALQDNF 124 Bacillus coagulans 36D1
KEZ54413               85 VYYQF-ED--YEKAKLYKKQLKTELDRCQKLLGKALQDNY 121 Bacillus indicus
KZZ82607               85 VFYEF-RD--FDAAMLYKKQLKVELERCQGLIEKAIKDNF 121 Bacillus sp. SJS
OAB76613               81 VLYHF-TDegSEKAELYKKQIKGDLDRCLGILNKAVNDNY 119 Paenibacillus crassostreae
KKB33397               83 VIYQF-DD--YEKAKLYKKQVKADLDRSMGLLRKALEDVY 119 Quasibacillus thermotolerans
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