3LHR,1Y7Q,2FI2


Conserved Protein Domain Family
SCAN

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pfam02023: SCAN 
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SCAN domain
The SCAN domain (named after SRE-ZBP, CTfin51, AW-1 and Number 18 cDNA) is found in several pfam00096 proteins. The domain has been shown to be able to mediate homo- and hetero-oligomerization.
Statistics
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PSSM-Id: 426568
Aligned: 190 rows
Threshold Bit Score: 66.3687
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3LHR_A           5 PEIFRQRFRQFGYQDSPGPREAVSQLRELCRLWLRPE--THTKEQILELVVLEQFVAILPKELQTWVRDHHPENGEEAVT 82   human
XP_012404142    45 EIFRQRFRQFAYHLTPGPREALCRLRELCHQWLKPEM--HTKEQILELLVLEQFLTILPEELRTWVQERQPRNGEEAVTV 122  Tasmanian devil
4_pfamImport     1 PETYRQRFRCLKVF-DESPKELYARLKELYEKWIQRK--NRTIKEVGEIIILEQFLRMLCPELQVWIKEHNPKSAAEAAT 77  
XP_011667770   152 EEGYRTKFRYAKLHQGETYVQYAHRIEKYLDRWIDLSsyDDNVEGLKSLLIQEQIFNTSSKECLMFVKERHPGKLTEVLT 231  purple sea u...
XP_011662566   146 EEGCRLKFRHAKIQSGETYIQFASRIEKYFDRWLELSpyDSSIDGMKSLTLQEQVLDTGNRELLMFIKERQPSSLQNLLI 225  purple sea u...
5_pfamImport     1 EETYRQRFRSTKKKEGQSYVEVGIQLMDLFRKWTASA--KDSVAELTELVVLEQLLNTMPTELQVWIREKKLKTVEEAAT 78  
16_pfamImport    1 PEAYRQKFRGFTKSSEESFIEFAREKEQLFDRWCVSTgvERNFDKLKQLVLMEEFKSCVSKQIRLFLEEKQVVDLETAAK 80  
XP_011405491    50 EETYRQRFRSAHIKRTETPLEMLTRITDLADKWLVS---CTTRKEVIDCVILEQFVNVLPEEARTCVKEHKPSSSKEAGQ 126  Amphimedon q...
XP_008103698   261 QEANRLKFRTNAFRPGQAPEEILLHLTDAAQQWLCPQ--EHSKEWIVDMVVLEEFLDVLPVDMRMWVRAREPSSSKEAAQ 338  green anole
XP_002408862   107 TEAFRQRFRGDTKKTEQSFTEFAYSLRSNLVEWLKSAevYGDHDRIVECIGLEQLCKCMPETVRFWVQDKVPETTQKAAE 186  black-legged...
3LHR_A          83 VLEDLESELDD 93   human
XP_012404142   123 LEDLEKELDEP 133  Tasmanian devil
4_pfamImport    78 LADVFVAARSK 88  
XP_011667770   232 LADQYHDAHTD 242  purple sea urchin
XP_011662566   226 LADQYRDAHSD 236  purple sea urchin
5_pfamImport    79 QADDYLLARQG 89  
16_pfamImport   81 LAEEYVLTHTQ 91  
XP_011405491   127 LAEDFRQARKD 137  Amphimedon queenslandica
XP_008103698   339 LAEAYFRECQP 349  green anole
XP_002408862   187 LAEEYLSRRGS 197  black-legged tick
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