3G23,4INJ


Conserved Protein Domain Family
Peptidase_S66

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pfam02016: Peptidase_S66 
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LD-carboxypeptidase
Muramoyl-tetrapeptide carboxypeptidase hydrolyzes a peptide bond between a di-basic amino acid and the C-terminal D-alanine in the tetrapeptide moiety in peptidoglycan. This cleaves the bond between an L- and a D-amino acid. The function of this activity is in murein recycling. This family also includes the microcin c7 self-immunity protein. This family corresponds to Merops family S66.
Statistics
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PSSM-Id: 426562
Aligned: 256 rows
Threshold Bit Score: 76.7168
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3G23_A           6 IAICAPSt------pFTrEDSARVIAL-AAAefpDLSLSfHEQcfaSEG------HFAGSDALRLSAFLECANDDAFEAV 72  Novosphingobi...
WP_013624167    12 IGIISPSnpitkdliP--QLNKGIDFF-QSL---GFEII-LAK-----NalsntlGYSATPEEKAEDINGMFKDPSIKAI 79  Syntrophobotu...
CDE15125        15 IGVVGVSnslklnnrYE-DLKKAENFLlSK----GFKIK-KGK-----YieedyyGSAGTNKQKSEDLMEMFKDDEVKAI 83  Clostridium s...
CDA59446        12 IGVIAPSnyiekddlE--YINASIALM-EAS---GFKVK-FGK---YVfed--tlGYGTSPEKRAADLNWAFKDDEVKAI 79  Clostridium s...
CDD36860        13 IGVIAPSspiigdnvE--ELNQAKKII-ENL---GFKVK-YSK---NIfsn--tnNYSATAKEKADDINEMFADKDIKMI 80  Clostridium s...
jgi:Sph21_2183  35 IRIIAPAqsllpkltQE-MRIRGVKRL-EEL---GLTVS-FGD---HVhei-defG-STTIDNRLADLHRAYEDKSVKAI 103 Sphingobacter...
P96129          19 VRVIAPScsmr-kidsS-VIERAQERF-RCL---GLNVA-FGD---HVyde-dflG-SASVDKRVADLHAAFADKKVKLI 86  Treponema pal...
CDE24326        14 IRIIAPSrsms-ilkeD-VINLARQRL-EEI---GLKVT-FGK---NVmkykdeyFKCATIEERIEDLHEAFKDKNVKVI 83  Clostridium s...
CCB88121        12 VRVIAPSnslt-vvseS-NRLLARERL-EKL---GLKIT-FGK---NVlet-glfG-SASIAARIEDLHEAFADPHVKGI 79  Simkania nege...
CDE05435        16 IGIASPSsi-----aKPeSYERTAFVL-GKL---GYRVK-FAKnlfSDSw----gFLA-SDEDRAADINELAADPEVKMV 80  Anaerotruncus...
3G23_A          73 WFVRGGYGANRIAEDA-LARLGRaasaKQYLGYSDAGTLLAALYAH-RIGrSVHA 125 Novosphingobium aromaticivorans DSM 12444
WP_013624167    80 VCSQGGATANACLPLLdWEAIRKn--pKIFLGISDITVLLNVFYAKiGLI-TFHG 131 Syntrophobotulus glycolicus
CDE15125        84 ICLEGGQTCNTFIDLLdYEEIKKh--pKIITGYSDITVLLQAIYKKtGLV-TFHG 135 Clostridium sp. CAG:470
CDA59446        80 MCVKGGEDSNTTLDYIdYEMIKKh--pKIICGFSDNTSILNAIHEKtGLV-TYHG 131 Clostridium sp. CAG:245
CDD36860        81 WCAKGGNNSNSTFEYInYDNIKRn--pKIICGFSDITSLTNMITEKtGLI-TFSG 132 Clostridium sp. CAG:356
jgi:Sph21_2183 104 LAVSGGTTSNQLLPYIdYKLLKDn--pKILCGLSDITALINTVYAKtDVV-TYYG 155 Sphingobacterium sp. 21
P96129          87 LTAIGGFNSNQLLQHIdYALLKKn--pKLLCGFSDVTALLNAIHAKtGMP-VFYG 138 Treponema pallidum subsp. pallidum str...
CDE24326        84 MTVIGGYNVNQILDYIdYKLIQEn--pKIICGFSDITALVNAIYAKtNMV-TYLG 135 Clostridium sp. CAG:440
CCB88121        80 LTVLGGYNSNQLLASIdYELIRNn--pKIFCGYSDITALQNAFLACsGLI-TYSG 131 Simkania negevensis Z
CDE05435        81 F-FGGGEGSPALPPLLdYDTIKKn--pKIYSSYSDGTTILSAITAMtGLV-TYYG 131 Anaerotruncus sp. CAG:390
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