1GUX


Conserved Protein Domain Family
RB_A

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pfam01858: RB_A 
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Retinoblastoma-associated protein A domain
This domain has the cyclin fold as predicted.
Statistics
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PSSM-Id: 426479
Aligned: 66 rows
Threshold Bit Score: 141.557
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1GUX_A          2 TPVRTVMNTIQQLMMILNSAS-DQPSENLISYFNNC-TVNP--KESILKRVK-DIGYIF---KE-KFAKAVGQG------ 66   human
XP_009403804  416 TPVSTAMTTAKWLREFISPLH-SKPSAELEHFLTSC-DQDI--TSTVTRRANiILEAIF---PSsSFGERSISGslqsvn 488  wild Malaysia...
B9SVG9        415 TPVSTAMTTAKWLRTVISPLP-SKPSPQLERFLASC-DRDV--TNDVIRRAHiILEAIF---PSnALGERCVTGslqs-t 486  castor bean
Q84QM3        419 TPVSTAMTTAKWLRSTISPLP-SKPSGELLRFFSAC-DKDV--TDDITRRAGiILGAIF---TSsSFGERICTSvrst-- 489  Japanese rice
Q9LKX9        275 TPVTSAMTTAKWLREVISSLP-DKPSSKLQQFLSSC-DRDL--TNAVTERVSiVLEAIF---PT-KSSANRGVSlglnca 346  Zea mays
CBI21251       20 TSQLSPCTPAQWLQTVICSLP-AKPSAELERFMSSC-DGNV--TDKVICRASiILAAIFprgCNgNRCMSSGLHnss--- 92   wine grape
EEF49309       54 SVLVGAQVTRKWLETVISPLP-SKPSAELERMLGIHdDKSI--LDEVMTRANvVLSALF---PKrQTVSSLQDVnl---- 123  castor bean
5_pfamImport    1 TPLSNALDNSKWINMYSKS----DPIKKIEELMNKI-NKEY--KSQLLEEAS-QIARDV---Y---YSVKKKNEvsg--- 63  
Q54FX2        628 TPISLTLTLESWLKVEIQNYRdPNPSLNLINILKS--ADQPqqTSEVDKMIE-RVSSLT---NNtDSLFSIGGIddhqqq 701  Dictyostelium...
XP_004350848  396 TPISSSLSMIEWIKKSIQNYQ-AEPSQDLKDLVKDCgEENVqfIQTMACDAL-NLAQPF-------LSQQVGSS------ 460  Cavenderia fa...
1GUX_A         67 ---CVEIGSQ--RYKLGVRLYYRVMESMLKSEE-ERLSIQ--N-FSKLLNDNIFHMSLLACALEVVMATYSRSTsqnlds 137  human
XP_009403804  489 mteDVAWAQE--RKMEALKLYYKVLREICLAES-RFLNHN--N-LTSLLSNERFHRCMLACSAELVLATHKTVIl----- 557  wild Malaysia...
B9SVG9        487 nlmDNIWAEQ--RRLEALKLYYRVLEAMCTAEA-QILHAT--N-LTSLLTNERFHRCMLACSAELVLATHKTVTm----- 555  castor bean
Q84QM3        490 nriDAIWTEQ--RKMEALKLYYRVLESMCRAET-QILSGN--N-LTSLLSNERFHRCMIACSAELVLATHKTVTm----- 558  Japanese rice
Q9LKX9        347 nafDIPWAEA--RKVEASKLYYRVLEAICRAEL-QNSNVN--N-LTPLLSNERFHRCLIACSADLVLATHKTVIm----- 415  Zea mays
CBI21251       93 -lmNSGWIEQ--RQEEALKLYYKVLESICESEA-QKLQGR--N-LTQLLTNERFHRCMLACSAELVSAAHMGVRm----- 160  wine grape
EEF49309      124 --mESMWSEQ--RRSEALKLYYRVLESVCQSEA-GKSNTS--DhLSGLLSNERFHRCLLACSAELVSAAQTGTGm----- 191  castor bean
5_pfamImport   64 -tdGIEY-----KVQKVLSFFQNVLEKLISDEEqKNFYKE--NvLISLLKNKSFIFSVLANCIMTHCFVKDIKGv----- 130 
Q54FX2        702 qqqQQEVKQR--RKNMAIQLYYCLLEKLIKFEQ---NTSS--N-INVLLNHEDFHKSLLSNSFEIIAYVYKMEGl----- 768  Dictyostelium...
XP_004350848  461 ----GGIEKEnkRSIYGIKLYYYLLEKILNIEK-ARIGSNspT-FKNFIMHGEFHKSLLITCFEIVAHAYKLVSv----- 529  Cavenderia fa...
1GUX_A        138 gtdlSFPWILNVLNLKAFDFYKVIESFIKAEGnLTREMIKHLERCEHRIMESLAWLSDSPLFDLI 202  human
XP_009403804  558 ----MFPAVLDRTGLTAFDMSRVIETFIRYEEtLPRELKRHLNSLEERLLESMAWERGSSLYNSL 618  wild Malaysian banana
B9SVG9        556 ----LFPAVLERTGITAFDLSKVIESFIRHEEsLPRELRRHLNSLEERLLESMVWEKGSSMYNSL 616  castor bean
Q84QM3        559 ----MFPAVLEKTGITAFDLSKVIESFVRHEDtLPRELKRHLNSLEERLLESMAWEKGSSMYNSL 619  Japanese rice
Q9LKX9        416 ----MFPAVLESTGLTAFDLSKIIENFVRHEEtLPRELKRHLNSLEEQLLESMAWEKGSSLYNSL 476  Zea mays
CBI21251      161 ----LFPRVLERIGITAFDLSRVTESFIKHEGsLPRELKRYLNSMEEQMLESMVWGKGSSLYNSL 221  wine grape
EEF49309      192 ----LLSVIFERTGVTAFDLSKVIESFIIHEPtLPRELRRHLNSMEEQLLERRVWEKGSSLYNSL 252  castor bean
5_pfamImport  131 ----NLEMVIKQSKITSLDYWRVISNFAKFDRhIPESIKQQLFNIEKQILLYIIWEEKECLMQNA 191 
Q54FX2        769 ----YFPHFINVFKLHPFSYLRLIDLVLKVDAdLPKLLAQHFSQIEEKILEKYVWSNNSTVFSTI 829  Dictyostelium discoideum
XP_004350848  530 ----EFPFFVKLFNVHPFSYCRIIDNIIKIDGaFPTNLINHFSKIDDQIIEKYAWSTGSPIFPLF 590  Cavenderia fasciculata
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