Conserved Protein Domain Family
DEDD_Tnp_IS110

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pfam01548: DEDD_Tnp_IS110 
Transposase
Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.
Statistics
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PSSM-Id: 426318
Aligned: 92 rows
Threshold Bit Score: 103.466
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015617670       12 VGIDIGARQNVVSAINFDQEFLIKmEPVPNTQfgaEQLE---SMLVKvleK-NTFKTVIIGLEST-SFYGVHIAnflSSS 86  Clostridiu...
WP_015050459        4 VGIDWADLHHDVAVLDEKGQELKY-FTVPHNR---EGLE---QLKQTl--L-GINPDPESFACLV-ETKNGLLVqflLEA 72  Thermaceto...
WP_013494820        4 VGIDQA-SQHHDVCLASAGQAPSY-LRVPNDA---DGLE---ELLAAi-rR-REPDPAQVHVAIE-GSGQGLFVaalLAT 72  Thermaerob...
Q2J579             21 VGDDWAQDHHDVEVQDETGRRLAK-GRLPEGVagiARLH---ALIGRh-lA-EDAGPEQVVVGIE-TDRGPWVRa-lVAA 92  Frankia ca...
jgi:Franean1_7122   4 VGDDWAEDHHDIEIQNEAGQRLAR-ARLPEGVaglARFH---ALIADh-lG-GDEDPSQVVVGIE-TDRGPWVGalvATG 76  Frankia sp...
jgi:Caci_8544       5 IGDDWAEDHHDVELMDERGKRLVK-ARIPEGV---AGIAklhELVGKa-lGeAAEDDTEVVVGIE-TDRGPW-VgalIAA 77  Catenulisp...
WP_013490917        5 CGIDWAEHHHDVALVNAGGDVLAT-FRISDDP---AGFA---RLVSR---I-GRHTMVLGSVGVAlETDRGLLVaalREI 73  Intraspora...
WP_014173877        5 CGIDWAEDHHDVAVVDEEGKLLAK-RRISDDA---EGHR---LLLEVl--A-EYDDRATALVPVAiETSHGLLVaalRAA 74  Streptomyces
BGI:SBI_08608       7 CGIDWAEDHHDVAMVDETGTLLAK-RRIGDDA---DGYR---LLLGLl--A-EYGDTSEAPIPVAiETSRGLLVavlRTG 76  Streptomyc...
WP_013678050       10 VGIDWAATNHAVCVLDSSGRRVTG-FGVEHTA---AGFT---GLIRRl--A-KLGEPGGVPVAIE-RPDGRLVDa-lLAA 77  Pseudonoca...
WP_015617670       87 ERLMPYKPYvycL-NPKEVAnykDsF-NSL-DKNDSIDSFVIADFAR--VGRIHTEPWRGSQYLALQRLTRHRLHIVECL 161 Clostridiu...
WP_015050459       73 GFPVYPLNP---K-VVDYRR---K---PSG-AKSDPIDARLLASIGRsdLAQLKRLKPDTELVCELKILTRDQDSLIQES 141 Thermaceto...
WP_013494820       73 GFQVYPVNP---K-AVDRYRd--RlS-PAG-SKDDRRDALVLAEILRtdRHRLQPLRLESDTLRQLRVVYSHHQTLVEER 144 Thermaerob...
Q2J579             93 GYQVIAVNP---L-QAARYR---ErY-STSgAKSDAGDAHSLADMVRtdRHQLRPVAGDSDTAEAVKIVARAHQNLIWDR 164 Frankia ca...
jgi:Franean1_7122  77 YQVYAINPL---S-AARYRE---RhV-TSR-AKSDPGDARVLADLVRtdRHHHRTVAADSDLAEAVKVLARTHQNLAWAR 147 Frankia sp...
jgi:Caci_8544      78 GYTVLAVNP---LvAARYRE---RrA-VSG-AKSDAGDAHMLADMVRtdGHQLRPVAGDSDLAEAIKVVTRAHKTLIWER 149 Catenulisp...
WP_013490917       74 GVQVFSINP---K-SVDRYR---DrF-AVSgAKSDAGDALVLAHLLRtdARQHRQIANDSQQVLALSALSRAHQDAVRTR 145 Intraspora...
WP_014173877       75 GRLIYAINP---M-AASRYRd--RhA-VSR-KKSDHGDAVVLANILRtdKASHRPLPAHSELSQAITVLARAQQDAVWNY 146 Streptomyces
BGI:SBI_08608      77 KRPIYAINP---L-AAARYR---DrHgVSR-KKSDPGDALVLANILRtdMHAHRPLPADSDQARAIAVLARAQQDAVWNR 148 Streptomyc...
WP_013678050       78 GYPVVAVKP---N-AIKTWRe--GeV-ISG-AKSDPGDAHVIAEYLRlrAHRLRAATPLSEDTRALRLVSRTRSDLVAAR 149 Pseudonoca...
WP_015617670      162 TREktymlsnvfLKFSGF 179 Clostridium pasteurianum
WP_015050459      142 TRLnnkl--iacLKEYYP 157 Thermacetogenium phaeum
WP_013494820      145 TRLlnql--iacLRTYYP 160 Thermaerobacter marianensis
Q2J579            165 TRQtqrl--rsaLLEFFP 180 Frankia casuarinae
jgi:Franean1_7122 148 QRHanll--rstLREFHP 163 Frankia sp. EAN1pec
jgi:Caci_8544     150 TRHtqrl--rhvLRDYFP 165 Catenulispora acidiphila DSM 44928
WP_013490917      146 LRDagrl--rshLREYYP 161 Intrasporangium calvum
WP_014173877      147 QQLsnql--rshLREYFP 162 Streptomyces
BGI:SBI_08608     149 QQLvnqv--rslLREYYP 164 Streptomyces bingchenggensis BCW-1
WP_013678050      150 VAAgnql--aalLDTAWP 165 Pseudonocardia dioxanivorans
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