5K31,4AE2


Conserved Protein Domain Family
COLFI

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pfam01410: COLFI 
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Fibrillar collagen C-terminal domain
Found at C-termini of fibrillar collagens: Ephydatia muelleri procollagen EMF1 alpha, vertebrate collagens alpha(1)III, alpha(1)II, alpha(2)V etc.
Statistics
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PSSM-Id: 426249
Aligned: 22 rows
Threshold Bit Score: 334.678
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5K31_A         18 RDLEVDTTLKSLSQQIENIRSPEG-SRKNPARTCRDLKMCHSD----WKSGEYWIDPNQGCNLDAIKVFCNMET-GETCV 91   human
EDO42953     1178 PSVSFMTALEKMEIDVNTIRKPTG-MKNNPAKTCKDLRMDHPD----YVSGYYWIDPNEGSKKDAIRVYCDFSN-DFSCI 1251 starlet sea a...
XP_011679217 1566 aMEVLFSSLDQLQTDVEGIKKPNG-TKDNPARTCKDLLMCHPK----TQDGYYWIDPNEGCPDDAFYAFCNMTAgGDTCL 1640 purple sea ur...
P20908       1607 GMEEIFGSLNSLKLEIEQMKRPLG-TQQNPARTCKDLQLCHPD----FPDGEYWVDPNQGCSRDSFKVYCNFTAgGSTCV 1681 human
2_pfamImport    1 GMEDVFGSLNNLKQDIERMKFPMG-TQDNPARTCNDLHLSQPD----YPDGEYWIDPNQGCIGDSIKVFCNFTAgGETCI 75  
P12107       1575 GMEEIFGSLNSLKQDIEHMKFPMG-TQTNPARTCKDLQLSHPD----FPDGEYWIDPNQGCSGDSFKVYCNFTSgGETCI 1649 human
NP_001073461 1463 GMEEIFGSLNSLRQEIESMRFPLG-TKESPGRTCQDLHLSQPD----LKDGEYWIDPNQGCARDSFKVYCNFTAgGETCL 1537 zebrafish
NP_001029004  603 RDEEMMVVLKELTNSVENIKAPRGvSKKTAARSCMDIYLAEQQqnivAKNGIRWIDPNGGCTADGIEVYCNFDT-METCV 681  vase tunicate
NP_999674    1199 QDTELLGAISALGQQIELIKAPQGkAKTNPARSCKDVFLNNVE----AESGYYWVDPNLGCQKDAIQVYCEAET-GATCV 1273 purple sea ur...
CAF98967      148 vdPGILATLKALSSQISNMKSPDG-SRKHPARTCDDLKRCYPM----KKSGEYWVDPNQGSVEDAIQVHCNMDT-GETCI 221  spotted green...
5K31_A         92 YPTQPSVA-QKNWYISKNpk-------dkRHVWFGESMTDGFQFEYggqg---sdpADVAIQLTFLRLMSTEASQQITYH 160  human
EDO42953     1252 SPTKAKLLnLRVQANVNK-----------KDKWLSEAFEEESQIDY----------SAEQSQIAFLRVFSKRAYQNVTYN 1310 starlet sea a...
XP_011679217 1641 APDNTTGH-HFYNYTEENstetkgyrkavPGEWFLENLRGKE-FSY----------QGGIVQLTFLRLLSSKATQKFTYS 1708 purple sea ur...
P20908       1682 FPDKKSEGaRITSWPKEN-----------PGSWFSEFKRGKL-LSYvda----egnPVGVVQMTFLRLLSASAHQNVTYH 1745 human
2_pfamImport   76 HPDKKSAGvRISNWPKEL-----------PGSWFSEFKRGKI-LNYvdm----aenTINTVQMTFLKLLSSSARQNFTYI 139 
P12107       1650 YPDKKSEGvRISSWPKEK-----------PGSWFSEFKRGKL-LSYldv----egnSINMVQMTFLKLLTASARQNFTYH 1713 human
NP_001073461 1538 YPSKAVENvKMNSWIKEK-----------PGSLFSQFAKGNK-FSYvds----vgeAVGVVQLGFLRLLSVQARQNLTYH 1601 zebrafish
NP_001029004  682 YPTNRHIE-NGTHYTGES-----------RHVYYGEEMATGSTVRYdpsdedrvphADYTSQLTFLRLLSRQVKQHVTFY 749  vase tunicate
NP_999674    1274 PSTNNVVS-NMTWYVGKT-----------KRAFFSSMHGGDK-FAY----------IEDSTQMTFLRLLSTSARQTVTYF 1330 purple sea ur...
CAF98967      222 SANPPSIP-RKVWWNTSKn----------KPVWFGADINRGTHFVYgnkd---qlaNTITVQMTFIRLLSKEASQTITYH 287  spotted green...
5K31_A        161 CKNSVAYmdq-qtGNLKKALLLQGSNEIEIRAEGNSRFTYSVTVDGCTSHTGAWGKTVIEYKTTKSSRLPIIDVAPLDVG 239  human
EDO42953     1311 CQNYKAW------TNRKHSIKLRGDNDLIFHAKSPKKFQPTVILNECTTKDDQWHKTILAIDTKQKHRLPIVDMALFDFG 1384 starlet sea a...
XP_011679217 1709 CVNGVAWyde-aeDSFDNAIRLLASNDEEFTFDGL--NQPKVIKDECKNKPSL-GETILEVNTSKLHQLPISDFAPLDFG 1784 purple sea ur...
P20908       1746 CYQSVAWqda-atGSYDKALRFLGSNDEEMSYD--NNPYIRALVDGCATKKGY-QKTVLEIDTPKVEQVPIVDIMFNDFG 1821 human
2_pfamImport  140 CHQSVAWyda-kaDNYDKALRFLGSNDEEISYD--NNLFIKPLVDGCSLKQGY-SKTVMEINTPRIDQLPIIDVMLNDFG 215 
P12107       1714 CHQSAAWydv-ssGSYDKALRFLGSNDEEMSYD--NNPFIKTLYDGCASRKGY-EKTVIEINTPKIDQVPIVDVMINDFG 1789 human
NP_001073461 1602 CQRSVAWtdqttdGGYKRALRLQGANDEEISYE--TSPYIKALIDGCSYRKGL-DRTVLEVNTPQVEQLPLLDIRISDFG 1678 zebrafish
NP_001029004  750 CRNMVAYyda-aaDNKAQALKLRGFGDAEFTAEGDPSTTYRVLHDGCTGRPSTWGKTDIEFTTGFVGRMPITDIAPFDIG 828  vase tunicate
NP_999674    1331 CKN------------VQGNPIFLSSSDVELVDDQDSKFNYRTLEDGCSSSSSQWGKSVYEYETKKTTRLPIVDFAPGEVG 1398 purple sea ur...
CAF98967      288 CKNSVAYmdq-kaGNLKKAIILKGANDLELKAEGNSRFRYTVLEDSCSEANGKWGKTVFEYRTQKTPRLPIVDIAPVDIG 366  spotted green...
5K31_A        240 APDQEFGFDVGPVCF 254  human
EDO42953     1385 KPHQKVTVEVGSVCF 1399 starlet sea anemone
XP_011679217 1785 RRNQKFGYTVGSACF 1799 purple sea urchin
P20908       1822 EASQKFGFEVGPACF 1836 human
2_pfamImport  216 ESNQRFGFELGPVCF 230 
P12107       1790 DQNQKFGFEVGPVCF 1804 human
NP_001073461 1679 EDNQKFGFEVGPVCF 1693 zebrafish
NP_001029004  829 GADQQFGAEFGPACF 843  vase tunicate
NP_999674    1399 SESQMFGLEMGPVCF 1413 purple sea urchin
CAF98967      367 GPDQEFGIDLGPVCF 381  spotted green pufferfish
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