5GV0,4AKM


Conserved Protein Domain Family
Lamp

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pfam01299: Lamp 
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Lysosome-associated membrane glycoprotein (Lamp)
Statistics
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PSSM-Id: 426189
Aligned: 70 rows
Threshold Bit Score: 107.273
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5GV0_A         2 PTVSKYNVTG--NNGTCLLASMALQLNITY-LKKDNKTVTR-AFNISPNDTSS-GSCGI-NLVTLKVENKNRA----LEL 71  house mouse
XP_028025225 133 PDQGNWTYTDseTNITCIVLKFAAQFNVTYtKVDNVSSFAHvVFNVPSNASVVnGSCAGdQWLEISWLAPNTTiannMTI 212 wild silkworm
XP_003768813 122 GTVGDYFGAN--GSQLCVRLRAQIQMRVLY-QSHDGEKLWG-IFILNPNRTVAqGGCEG-NRSSLNLSFPEGK----LIF 192 Tasmanian devil
XP_006105570 169 AAVGDYTWTN--VSLPCVHLQAQIQIRIRY-PTQGGKEAWG-ISVLNPNKTTPqGGCEG-AHPHLLLSFPYGQ----LSF 239 little brown bat
XP_016825511  95 EALGNYTWTN--GSQPCVQLQAQIQIRILY-PTQGGGKAWG-ITTLNPNKTKVqGGCDH-AYPHLSLSFPYGR----LTF 165 Chinese hamster
Q4FZY1       129 GALGNYTWTN--GSQPCVQLQAQIQIRILY-LTQGGKKAWG-LSVLNPNKTKVqGGCDS-AHPHLALSFPYGQ----LTF 199 Norway rat
ELW63601     153 NAIGDYVWTN--GSQPCVHLQAQIQIRVLY-PTQGGGKAWG-TSVLNPNQTKVqGGCEG-AQPHLLLSFPSGH----LHF 223 Chinese tree shrew
XP_004058553 155 ETIGDYTWTN--GSQPCVHLQAQIQIRVMY-TTQGGGEAWG-ISVLNPNKTKVqGSCEG-AHPHLLLSFPYGH----LSF 225 western lowland...
XP_003466301 132 EAVGDYTWTN--GSQPCVRLQAQIQIRVLY-PTQGGGEAWG-ISVLNPNKTKVqGGCAD-AHTHLRLSFPYGH----LSF 202 domestic guinea...
Q2KIW2       136 EAIGDYTWSN--GSQPCVRLQAQIQIRVLY-PTQGGGEAWG-ISVLNPNRTKAqGGCEG-THSHLLLSFPSGQ----LSF 206 cattle
5GV0_A        72 QFGMNAS--SSLFFLQGVRLNMTL--PDALVPTFSISNHSLKALQATVGNSYKCNTEEHIFVSK----MLSLNVFSVQVQ 143 house mouse
XP_028025225 213 YYHKNKT--TNNYYLKSLNVSFSPelFVNASKANSLELYHGNEWMTPVATSYRCEVATRFNMSSdsltAASMTLTRLQEE 290 wild silkworm
XP_003768813 193 GFKQDSI--MKSVYLSYLATEFNVsfPSAIRWTFSAENSSLQDLQAPLGYSFCCRNR-SIALSP----EIHLDLLALQLQ 265 Tasmanian devil
XP_006105570 240 GFKQEPL--QSTVYLNSVAVEYNVsfPQATQWTFSVQNSSLRELQAPLGQSFSCRNA-SIILSP----AFHLDLLFLKLQ 312 little brown bat
XP_016825511 166 GFKQDME--QGTVYLNYMAVEYNVsfPQAAQWTFSAQNSSLRELQAPLGQSFCCRNT-SIVLSP----AVHLDLLFLRLQ 238 Chinese hamster
Q4FZY1       200 GFKQDRHqsHSTVYLNYMAVEYNVsfPQAAQWTFSAQNSSLQELQAPLGQSFCCGNT-SIVLSP----AIHLDLLSLRLQ 274 Norway rat
ELW63601     224 GFQQEAQ--QSTIFLSYMAVEYNVsfPHAAQWTFSAQNSSLRDLQAPLDRSFSCRNA-SITLSP----ALHLDLLFLRLQ 296 Chinese tree shrew
XP_004058553 226 GFMQDLQ--QKVVYLSYMAVEYNVsfPHAAQWTFSAQNASLRDLQAPLGQSFSCSNS-SIILSP----AVHLNLLSLRLQ 298 western lowland...
XP_003466301 203 GFKQAVQqsQSVVYLSYMAVDYNVsfPRAAQWAFLAQNSSLRDLQAPLGQSFSCGNA-SILVSR----GFHLDLLSLRLQ 277 domestic guinea...
Q2KIW2       207 GFKQDPL--QSAVYLNYMAVEYNVsfPQAVQWTFSVQNSSLRDLQTPLGHSFSCRNA-SIIVSP----ALHLDLLSLKLQ 279 cattle
5GV0_A       144 AFKVD 148 house mouse
XP_028025225 291 AYRTA 295 wild silkworm
XP_003768813 266 AAQLL 270 Tasmanian devil
XP_006105570 313 AARLP 317 little brown bat
XP_016825511 239 AAQLP 243 Chinese hamster
Q4FZY1       275 AAQLP 279 Norway rat
ELW63601     297 AAQLP 301 Chinese tree shrew
XP_004058553 299 AAQLP 303 western lowland gorilla
XP_003466301 278 AAQLP 282 domestic guinea pig
Q2KIW2       280 AAQLS 284 cattle
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