1ZM8,6NJT,3S5B


Conserved Protein Domain Family
Endonuclease_NS

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pfam01223: Endonuclease_NS 
Click on image for an interactive view with Cn3D
DNA/RNA non-specific endonuclease
Statistics
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PSSM-Id: 426136
Aligned: 56 rows
Threshold Bit Score: 69.0012
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1ZM8_A        27 LGNPSGATPTKLTPDNyl-mVKNQYALSYNNS--KGTANWVAWQLNSSWLGNAe------RQD------NFRPDKTLPAG 91  Anabaena sp.
Q9VAU2       106 IPSATFAVGFSFNGR-----FMELYRNCFDGY-----SLAFQHSIYKAYRYVNtv---prPNP------TWQSDQLSGGF 166 fruit fly
Q9VAU3       102 CPATMYRVGYNVGNNQ----FLELYRACFDTR--AVRAIFVEHRVYGKPFYITrp------------cvQFSSDGVISGA 163 fruit fly
O33735        73 RTTERVYKKSGQSTKPv-----tVSNIHYSVLdgYGRSGEAYGIITKDMIDMSagy--reKWEskpepsGWYSYFFKNTN 145 Streptococcus p...
WP_002983479  60 ETSPNYYKVLGESGIVen-lFPPKGQIVYGGLdsLGRTLTVRGTLTFNNVLGSynirkdfKRSkaetlsGWLGNKNGEVY 138 Streptococcus p...
Q48R25        80 NDSPNYYKTLGTSQITpa-lFPKAGDILYSKLdeLGRTRTARGTLTYANVEGSygv--rqSFGknqnpaGWTGNPNHVKY 156 Streptococcus p...
WP_000865436  87 SGGKAAIEVNNGQSSLdi-aTWKENKVIYGDLdsLNRTTFVTAYLDRKNLGRSe-----gRERqvwqptGWHQKQIDGDP 160 eubacteria
Q8E067        86 QSGAFIINQNKTDLNAkv-sSAPYAINEIKKVnnQIVPTKANALLTKATRQYRnre-etgNGRtywkpaGWHQINGLKGS 163 Streptococcus a...
Q9CJ50        41 NSSQVSTKSLASSVKQapltFKNQRQMVMANTdaLGRAVDSHIQLKDSQEPKVk------REPltynpvGWHNYNFYYKK 114 Lactococcus lac...
Q7QH21        92 DNGTIVRVGFSVDEAR----FAALYEVCFDER--NLRTHYTKHRLTPHNDHHQra----vKRP------SFLQGEFYGDL 155 Anopheles gambi...
1ZM8_A        92 wVRVT-PSMYSGS-------G-----------------YARGHIAPS-ADRTk------TTEdNAATFLM-TNMMPQTPD 138 Anabaena sp.
Q9VAU2       167 dNA---YEGRATQaclltnlGavqp----------qckFDRGHMTPA-SAFI-------STElKKSTFRY-LNAIPQYRG 224 fruit fly
Q9VAU3       164 dEAS--YTVRNIHgtfrrlfGnnqnyip----nnrdviINRGHLAAS-ADFFf------GDQ-LCATFKY-VNAVPQFKS 228 fruit fly
O33735       146 qRATEsDYKHSPKnvskisnNikasillsngnvrngylFDRSHLIAD------------SLGgRPFRNNLiTGTRTQNVG 213 Streptococcus p...
WP_002983479 139 vIKGLgDDSYQGYf------------------------WNKSHLIAD------------SLGgDALRVNAiTGTRTQNVG 182 Streptococcus p...
Q48R25       157 kIEWLnGLSYVGDf------------------------WNRSHLIAD------------SLGgDALRVNAvTGTRTQNVG 200 Streptococcus p...
WP_000865436 161 i-------------------------------------VNRGHLLAYtSSFNfdidgnfKIGeNGSQDNP-KNLATQTAF 202 eubacteria
Q8E067       164 yNHA----------------------------------VDRGHLIGY-ALVGs------LRGfDASTSNP-KNIATQAAW 201 Streptococcus a...
Q9CJ50       115 sDGSIgkm----------------------------wlMARGHLVGY------------QFSgLNNEA---RNLVPETAW 151 Lactococcus lac...
Q7QH21       156 kMATL-YSFAAQHatlarilSsparadal-lsskkglfFARGHLAAK-SDFVf------GAH-QRASFWF-MNVAPQWQR 224 Anopheles gambi...
1ZM8_A       139 NN--R--NT-------WGNLEDYCREL--VSQG-K--------------ELYIVAGPNGSLGKPl--------------- 175 Anabaena sp.
Q9VAU2       225 VN--R--GK-------WKAVETWVNNM--VRGLyDnpiinnvqiprtydVLKVCIGALGVHRLRhntnnnmi-----piy 286 fruit fly
Q9VAU3       229 IN--D--GN-------WETIERFVRNS--VTG--Nn-------------FVNVRTGARGVLSLPsgnrpk--------nv 272 fruit fly
O33735       214 NNdrK--GG-------MQYIENKVLDH--IKRNpKv-------------HVYYKATPVYQGSEL---------------- 253 Streptococcus p...
WP_002983479 183 GRsgN--GG-------MRYTEIKSQKW--LEAHrDg-------------YLYYEAMPIYQGNEL---------------- 222 Streptococcus p...
Q48R25       201 GRdqK--GG-------MRYTEQRAQEW--LEANrDg-------------YLYYEAAPIYNADEL---------------- 240 Streptococcus p...
WP_000865436 203 SN--Q--KV-------QTHYEKLVRDAqkLK---Gn-------------KVIYQIVTVFRGKEL---------------- 239 eubacteria
Q8E067       202 AN--QanSNqs---tgQNYYETLVRKA--LDR--Hk-------------TVRYRVTLIYDRDNL---------------- 243 Streptococcus a...
Q9CJ50       152 FNggNftGTndgntasMLYYENRLDSW--LANHpNy-------------YLDYQVTPLYEGNEL---------------- 200 Lactococcus lac...
Q7QH21       225 FN--G--FS-------WQRIESGVKAY--VAAN-Dl-------------RLTVYTGTYGVLKLLdgngdgqeifldydan 277 Anopheles gambi...
1ZM8_A       176 ---kGKVTVPKSTWKIVVVLDSPGSgleGITANTRVIavnipndp------elnndwrAYkvsvdELESL-TG--YDFLS 243 Anabaena sp.
Q9VAU2       287 lldnNKIPVPEWMYKIVSHLSG-DKwvmLTYNDVSLPnqqaln----------qichvIPchpglNLNTKdVG--HTVCC 353 fruit fly
Q9VAU3       273 flsgNRNPVPQWMYKIVRNANNQPIvafLTLNNIYARqrpaa-----------pnfcqPVncpvaLVNTAqAG--FSFCC 339 fruit fly
O33735       254 --------LPRAVLVSALSSDG------------------------------------FIdetvrVFNNV-AGfnIDYQN 288 Streptococcus p...
WP_002983479 223 --------VPRAVVVSVLSSDN------------------------------------TInekviVYNVA-NGytIDYNQ 257 Streptococcus p...
Q48R25       241 --------IPRAVVVSMQSSDN------------------------------------TInekvlVYNTA-NGytINYHN 275 Streptococcus p...
WP_000865436 240 --------MPRGYWLQAIDSAG------------------------------------TLnfnvyEYNVQ-PNvvFNYEE 274 eubacteria
Q8E067       244 --------LSSGSHIEAKSSDG------------------------------------SLefnvfIPNVQ-SGllFDYAT 278 Streptococcus a...
Q9CJ50       201 --------LPRQIRLAYVGIDK-------NGQTLSIKlgggr------------eksgNGgatvvVLDNVaPNakINYAD 253 Lactococcus lac...
Q7QH21       278 repaGKVPAPALFYKVLLDEANDAGlalVGVNNPHATpeeiaadyvvckdvsdavrwlRW-----DRNSIeDG--YVYAC 350 Anopheles gambi...
1ZM8_A       244 NVSPN 248 Anabaena sp.
Q9VAU2       354 DPYRF 358 fruit fly
Q9VAU3       340 NPATF 344 fruit fly
O33735       289 GGLLT 293 Streptococcus pyogenes
WP_002983479 258 GTFSA 262 Streptococcus pyogenes
Q48R25       276 GTPTQ 280 Streptococcus pyogenes serotype M28
WP_000865436 275 GTSQI 279 eubacteria
Q8E067       279 GKVKQ 283 Streptococcus agalactiae serogroup V
Q9CJ50       254 GTAVN 258 Lactococcus lactis subsp. lactis
Q7QH21       351 DVNEF 355 Anopheles gambiae str. PEST
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