5ITQ,3A45


Conserved Protein Domain Family
Fapy_DNA_glyco

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pfam01149: Fapy_DNA_glyco 
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Formamidopyrimidine-DNA glycosylase N-terminal domain
Formamidopyrimidine-DNA glycosylase (Fpg) is a DNA repair enzyme that excises oxidized purines from damaged DNA. This family is the N-terminal domain contains eight beta-strands, forming a beta-sandwich with two alpha-helices parallel to its edges.
Statistics
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PSSM-Id: 426081
Aligned: 677 rows
Threshold Bit Score: 48.6583
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5ITQ_A                 1 MPEGPELHLASQFVneaCRaLVFGGCVEKSSV-----SRN----PEV----PFESSAYRiSASARGKELRLILsplpgaq 67  human
WP_015893701           1 MPELPEMENYRRLL---QE-KIGGGTITATHVqrektINLp---PAEfa-rLLQDNRLT-LVDRRGKHLLFHLe------ 65  Breviba...
WP_013371485           1 MPELPEMENYRILL---SK-QILDIPITGVTVsreksINTe---VETfk-kQLLGATVV-YLERRGKHLIFHLn------ 65  Paeniba...
WP_015734677           1 MPELPEMENYRRLL---SQ-SILNVPITDVVVnreksLNVt---IDEft-sALKGSKVI-FVERRGKHLIFHLh------ 65  unclass...
WP_025335224           1 MPEFPEMENYRRLL---SK-HIVNVPITGVTVnreqsINVe---LEQfk-kSLTGARMV-FVERRGKHLVFHLh------ 65  Paeniba...
zhongguo:PM3016_3180   1 MPELPEMENYRILL----SgRITGRTITGAEIgreksINVa---PERfr-mDVIGSSVR-VIERRAKHLLFHLt------ 65  Paeniba...
jgi:Bcell_0842         1 MPELPEMENYRLLL---NE-RIAGQKVTGVEVtrektINV----PVQsflkEVNGTIIE-HIDRRAKHLIFKLs------ 65  Bacillu...
jgi:Pjdr2_2633         1 MPELPEMEHYRLRL---SE-LIIGSPITGTEVtrdksINIs---AEQfe-aELVGRTIW-FVERRGKHLLFHLd------ 65  Paeniba...
WP_015254620           1 MPEWPEMEHYRKLL---ME-RIGGQRIVGVEIerpqsINVd---PGEfa-rETIGSAVW-YVERRGKYLIFHLd------ 65  Thermob...
3A45_A                 1 MPEGPEVALTADIL---EK-YFKGKTLEYIDFisgrySKSepegYDDfi-aNL-PLKVS-NVDTKGKFLWFELfdpn--- 70  Acantha...
5ITQ_A                68 pqqEPLALVFRFGMSGSFqLV---PREELP--R-HAHLRFYTAppgPRLALCFVDIRRFGRW 123 human
WP_015893701          66 ---sGHVLLLHLMLGGFL-YL---GSAEDKlkR-TAQVTLSF----GERLLYFHGLR-LGYL 114 Brevibacillus brevis
WP_013371485          66 ---tGKRLVLHLMLGGLL-YLg--TEEQRP--DrTIQIELDF----SGVKLYFIGLR-LGYL 114 Paenibacillus
WP_015734677          66 ---nGGRLLLHLMLGGIL-YLgrrDDEERPs-R-STQVEITF----GDQVLYFIGLR-LGYL 116 unclassified Paenibacillus
WP_025335224          66 ---dGRRLLLHLMLGGLL-FFg--TEEERPs-R-STQVEIAF----GDRILYFMGLR-LGYL 114 Paenibacillus sabinae
zhongguo:PM3016_3180  66 ---tGNVLVLHLMIGGIL-YYg-rLEDQPD--R-TIQVRISF----GDEHLFFIGLR-LGYL 114 Paenibacillus mucilaginos...
jgi:Bcell_0842        66 ---nGKRLVLHLMLGGVL-FLg-nGENDPD--R-TRQVTLTI----GKIELFFIGLR-LGYL 114 Bacillus cellulosilyticus...
jgi:Pjdr2_2633        66 ---nGKRLVLHLMLGGTL-FFg--SEEERPd-R-TVQVTIRF----ATGNLYFIGLR-LGYL 114 Paenibacillus sp. JDR-2
WP_015254620          66 ---nGKRLLLHLMVGGSL-FFg--TEEERPd-R-TAQITLQF----PNGNLYFIGLR-LGYL 114 Thermobacillus composti
3A45_A                71 dksNKWYIWNTFGLTGMWsLFe---------aK-YTRAVLSFD---NELMAYFSDMRNFGTF 119 Acanthamoeba polyphaga mi...
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