1YBF_B 27 PYILLTNFSHYLHVFAEH----------YGVPi--VGEHTSXPNAs-----AEGVTLINFGXGSANAAtiXDLLWAIH-- 87 Bacteroides th... Q6AVB5 53 YLGVVVPNGFEMEPLLRSpafspakklpYLDV---AGRRFRFGSIg-----EKKVIIVMTGLGMLNSG--VTTQLLLTlf 122 Japanese rice jgi:Dole_1278 5 RILILTATPVEAAPLVDRi--------sGANA----AGNRVTGMLg-----GTPVRVLVPGPGPVNTA--MALTAVMEkt 65 Q39Q81 3 SIIIAAATSLELSLLVRSiga-----reVRRKk--GFSDTYRGKVg-----GTTVLLAVTGIGKANTA--SALTALLEry 68 Geobacter meta... Q6F7X8 48 RLAIIAAFGQEADLLIEStkd----kkeYIIN----GRKFVTGTLe-----GAEVVITLSGISMTNAA--MTTQMITDhf 112 Acinetobacter ... jgi:Veis_4426 49 RIAVISAFAPELALLLAQlq------qpVSHRi--GGVEFSTGLLa-----GKPVVLFLSGISMTNAA--MNTQRVLDrf 113 Q94K59 47 YIGLVTVIATEENAFLRSvdfrpdpthpFLDL---SGRRFRIGKIh-----GKKVVYVRCGRGMVNGA--AATQQMIDvf 116 thale cress Q836S7 2 KLGVIAAMDLELQKLLEYf--------pPQRKiqlAKNTFYIYEQk-----TSQVIMVCAGQGKTNAT--LYSQILIDsf 66 Enterococcus f... P96122 2 TVGVFAALGEEVARVREClgg-----vgTERA----GLTFYVVSVg-----ALQVVYVCGGVGKVNAA--LCTQLLISef 65 Treponema pall... BAF39056 3 AIAIIGAMDEEVANIATAlsn-----vtVTEE---AGVKVTRGTLetnkgtAVNVAATVGGMGTVNIA--ATTQHLIDad 72
1YBF_B 88 -PKAVIFLGKCGGLk-LENALGDYLLPIA-----AIR---------GEGTSN---------------------------- 123 Bacteroides th... Q6AVB5 123 dVEGIVHFGIAGNAd-PDLHIGDVTVPRYwahtgLWNw--------QRYGDGpekelalesngdytrkygalnfsdygva 193 Japanese rice jgi:Dole_1278 66 lPALVLQTGCGGGFaqAGINKGDVVVATE-----MIDv--------QSGVEPatppdivda------------------- 113 Q39Q81 69 tPRLLIDTGCAGAYggGGLAVGDLAVAST-----EVYg-------dEGILTPsg-------------------------- 110 Geobacter meta... Q6F7X8 113 nLKGIVFSGIAGSLn-PDLHVGDVVIAKS-----WLApnevyynntKDLPSAcgkpgdisclgikladnvpawknqflre 186 Acinetobacter ... jgi:Veis_4426 114 dISHIMFSGIAGGVn-PGLHIGDVSVPAQ------WGqym---ewlMAREGPpgqysvpewmksellplp---------- 173 Q94K59 117 nVKGIVHFGIAGNMn-NSMSIGDVSIPKQ-----ITNag------lWDWLNPdkvkgvediayldvgnynvpkgd----- 179 thale cress Q836S7 67 qIEQLINIGICGCLn-EKLQLFEMVLGEE-----YCH---------YDIRERqs-------------------------- 105 Enterococcus f... P96122 66 gARVLINTGIAGALd-ERLCVFDVLVSVD-----AVQ---------HDVDVTafgyqkgriprmd--------------- 115 Treponema pall... BAF39056 73 qPDAVIFSGIAGNLn-TNLHINDVVLGGTl---rYLD---------TDMRLVgqf------------------------- 114
1YBF_B 124 -------------------------DYLPEEVPSLPSFSVLRAISSa---------IQNKG------------------- 150 Bacteroides th... Q6AVB5 194 gggggnllngvwyqpeevfpadgtpESRRHEFWVPVDGRYYQLAQK----------LEAMPlercvnrtgtatspatcla 263 Japanese rice jgi:Dole_1278 114 -----------------lpfpvlktPAGEITNRYPADIRLADTACR----------AARNAp------------------ 148 Q39Q81 111 ------------------------wESLEIIGIPQLERGGRRFFNEfplallpaerAVQLGaa----------------- 149 Geobacter meta... Q6F7X8 187 tnvmnssnyksvaltskfgdtdvpmAYGEMRVDFPVDSKMLNMIDKvqkptetklePICSGanc---------------- 250 Acinetobacter ... jgi:Veis_4426 174 --------afgmmhprsvqvrsaasPQISQQFWFAADARMLALARS----------LQDIDlahch-------------- 221 Q94K59 180 ---gdnelgsigynyeqlysvtghiNAPQNVFWINTTQEWLHLAADlekmelsqcvNASLClp----------------- 239 thale cress Q836S7 106 ------------------------iNKFPYQLYYKGDKGMLAELQHl--------------------------------- 128 Enterococcus f... P96122 116 -------------svewtantalryLVREAFDLCTRDPEWTEGACA----------LSGSGdpp---------------- 156 Treponema pall... BAF39056 115 ----------------------kpgTADRPIEEYHSDDRLLELADQa---------LNDLN------------------- 144
1YBF_B 151 -----KDYWTgtvYTTNRRVWEY--DEKFKd--YLRSTHASGV-DXETATLXTVGFANKIPXGALLLISDrpxfPEGVKT 220 Bacteroides th... Q6AVB5 264 rapavARVER---GCSASVFVDN--AAYRQf--LRSRLGVTPI-DMESAAVALVAAQQGAPFIAIRSLSDla-gGGSAES 334 Japanese rice jgi:Dole_1278 149 -----MATGCgaaMGPIGSVVTIt-ATDLRaqaLFDRFG-LCMeAMEGAAAAHVCLHYGVPFLEIRGASNiag------- 214 Q39Q81 150 ---lgVPVRRgrfVTVSTCSGTT--ARGNA---LARRFNAICE-NMEGAVAAHLALRYGIDCLELRGISNmve------- 213 Geobacter meta... Q6F7X8 251 ---yhPKIVIgqrGISSGAFLAN---AEYReylHKNLLG-DCV-DMETAAVAQVAYSNNIPFIAFRSLSDlagaDHDPN- 321 Acinetobacter ... jgi:Veis_4426 222 -agqcLQRRPrvvVGGNGVSGPAfvDNKAFreyTFNTFEAQVL-DMETAATAMVAHGNGVPFIAFRSLSDlaggGAGD-- 297 Q94K59 240 ---kkPKLVVglkAATAYIFVDN--AAYRNf--LYDTFGVSSS-DMESSAVAMTCASNGYPIIVIRGLSDlageGGD--- 308 thale cress Q836S7 129 ----dEKIKCvrfGTGEGFVCDT--TEKRN---LIEQFSIDCV-DMESAAIAQCCFLNDCAFVSIRIICD----RADANA 194 Enterococcus f... P96122 157 --srvSRLVEgrvASGDLFVSDA--QTRAR---IIREFGAHGV-EMEGAAFAHVASVNGVPFVIIRCISD----GAGAEQ 224 Treponema pall... BAF39056 145 -----IHHIVgiiATGNYFVDDP--QKVEQ---VIRETGADAV-EMEGAAVAHVAARNDVPALVIRALSD----NADTDY 209
1YBF_B 221 e--ESDQLVTDNFAEEHLXLGIDALE 244 Bacteroides thetaiotaomicron VPI-5482 Q6AVB5 335 ---NEAGVFAALAAQNAVAVAVKFIS 357 Japanese rice jgi:Dole_1278 215 -rrDRADWDIPLAATNAAISVCAFIA 239 Q39Q81 214 -drDLSGWNIPLAVERAQRFILKFLE 238 Geobacter metallireducens GS-15 Q6F7X8 322 ---VAAFFGSGIAQRNAAKLTMAFID 344 Acinetobacter baylyi jgi:Veis_4426 298 ---NEMATFMQLAAANSAKVLLAFLA 320 Q94K59 309 ---NTVHKFGSLAATNTAKAVLEFIR 331 thale cress Q836S7 195 v--KVTEDTQTQAMEKVFELVCAYIN 218 Enterococcus faecalis P96122 225 dvsMSYKEFSTRAARRSALLTLRVLE 250 Treponema pallidum subsp. pallidum str. Nichols BAF39056 210 e--DFKTFDISEYADTAAKLTVNIAK 233
Jiyao W et al.(2023). "The conserved domain database in 2023.",