Conserved Protein Domain Family
UbiA

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pfam01040: UbiA 
UbiA prenyltransferase family
Statistics
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PSSM-Id: 426009
Aligned: 884 rows
Threshold Bit Score: 33.3546
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EEH55642         17 CVAPLI-VAasLCHHWYGCVNA-SQFGLFALGGC--LVIAWLNLSNDAWDAATGVDDDkemdgggkpesivR------LM 86  Micromonas p...
WP_012175513     17 FLMPVFlFA--LGISINPSGYR--IVLTFIV--LhlFIYPASNAYNSYFDKDEESI---------------GglkhppAV 75  Desulfococcu...
WP_013632819     20 FLLPVF-LF--ALSQSPLVNNY-KAILVFLILHL--FIYPASNAYNSYFDKDEASI---------------A------LL 72  Pseudopedoba...
jgi:Solca_3274   23 FLMPVF--L--FALSQAESINW-QNTLLSFIILHl-FIYPASNGYNSFMDQDEGSI---------------G------GL 75  Solitalea ca...
jgilanl:CHU3793  20 FLMPLF-L---LALSQSGVYIL-SVYVLISFFIIhfLVYPSSNGYNSYIDKDEDSI---------------G------GL 73  Cytophaga hu...
CCH02641         32 LLPVCL-FA--LTLPPGIASPD-WGRVVWILVVIhvLMYPAANTFNSYYDRDEGSV---------------Ng-----LE 87  Fibrella aes...
WP_013388868     19 IFFPLL-LGqgFYYNITRNFSI-VFFILVQLFGL--LIQLYIVYANDYADYEIDKTNDtfni------fsgGsr---vLV 85  Ilyobacter p...
Q6L2T0           18 SVSPVI-IA--FSFDHYKKLYL---FIIMVLIVL--FMQAALNLSMDYYDYKNGKKLYnddt------lfpVgp--ylII 81  Picrophilus ...
Q2LX93           21 TLIPLT-VG--AVLAGRQGALSvPTFLLVLLACF--LVHFATNISNDYFDHIQGTDAGksi-------ggsR------VL 82  Syntrophus a...
BAM00372         22 VLPSVL-AAv-IGGWWQGELIW-PNFLFAIISVL--LSAFAFQMLSAYQDFQQSLRAEaypatd-lpnsafT------LQ 89  Caldilinea a...
EEH55642         87 -GGDVHa--VNKVSL-LAVGCLLSGIGALvmastvdvAGVS-SNVLSMLGVAVLCG-QAYQgppFRMSYKGL--GEPLCF 158 Micromonas p...
WP_012175513     76 ---------ERDLYA-TSLVFDGAGILLA--------LCIS-RQFAVMVFIYGLIS-KAYShpsIRIKKYPWl-SWLIAG 134 Desulfococcu...
WP_013632819     73 kNPPKV---NKSLFI-TSNILEWGGVLLS--------LLVS-LEFAFAMIIYNSFS-KAYShpkIRIKKHPVl-SFLVIF 137 Pseudopedoba...
jgi:Solca_3274   76 kHPPKP---TKKLFY-ISILLDFIGLSLS--------FFIS-IPFSICLLMYILAS-RAYSykgIRLKKYPYl-GFITVI 140 Solitalea ca...
jgilanl:CHU3793  74 eKPPMP---TKKLYY-LTLVLDVLALLLAy-------FLVS-PLFALCILMYMLAS-RAYSskeIRLKKYPYi-GFLVVV 139 Cytophaga hu...
CCH02641         88 -APPPV---DRTLFW-VSMGLEALALVGG--------VLIN-WQFVFFILVYGAFM-KAYShtaIRIKKRPVa-SWLLIS 151 Fibrella aes...
WP_013388868     86 -ENLISkkeMKKAIIlVVGLNGFLGIVLTl-------GFRR-ILSLPIIILSFLLL-WAYSyppIRLSYRGG--GEVLQT 153 Ilyobacter p...
Q6L2T0           82 -KNHVN---PKIIRY-FFIITMLIAVSLGiy----llVITE-KYYLIIIGIIAVIVsLLYVlppVMLDNRGL--GEISTF 149 Picrophilus ...
Q2LX93           83 qEGKIS---VAELGR-AIILLYSVAAMIGfy----ltWTLKlWALVPLMSLAFFSS-LFYVappIRYGYHGL--GELFVG 151 Syntrophus a...
BAM00372         90 qNGLLH---PIMLLN-VGALLYTASALCGlw----laLLAG-WPVLFFGALAFLLQ-LGAVispVRYAYRGYgmGELGVF 159 Caldilinea a...
EEH55642        159 AA-FG-PLATGAFYLalaagTGGSVwvnapltpvlsQGGVFGAAIMvGLTTTCILFTS-----HFHQEAGDRAAGKMS-- 229 Micromonas p...
WP_012175513    135 FF-QG-LFTFWMCYM-----ALNHRgfdvi--lqadIFIPAVLTTL-ILMGFYPLT-------QIYQHKEDKKRGDLT-- 195 Desulfococcu...
WP_013632819    138 IF-QG-FFIFYACYNgi-ssYTYQL-----------NMDVIVAGMIcSCLIGASYPLT-----QIYQHEEDNRRGDIT-- 196 Pseudopedoba...
jgi:Solca_3274  141 FSqGA-FTFLIAYHAitllsYQEIIn----------RQLLALIACSlLLAGVYPLTQ-------IYQHEEDYKNGDIT-- 200 Solitalea ca...
jgilanl:CHU3793 140 FF-QG-AFTYYTCYAg---iTGH-Alel------nkPALFLLLAGSfQIAGAYPLT-------QIYQHQQDLRDGVIT-- 198 Cytophaga hu...
CCH02641        152 TFqGG-FVFLMTYVI-----VHNINlat------vfQPGTWPAGVAlGTLISTLNILAlypvtQVYQHAEDASRGDLT-- 217 Fibrella aes...
WP_013388868    154 MG-VAvILPLFGYYV-----QGGTV-----------QGFPWIFLLFfFPLQLGCAMST-----SLPDYPSDKKGNKKT-- 209 Ilyobacter p...
Q6L2T0          150 LS-FG-PLVYTGAVI-----VFNLN-----------VDVFVLITGIfTGLMASAIRF-------LHHSIEDKPNGTRVth 204 Picrophilus ...
Q2LX93          152 VN-MG-PVMVLGTAWv---lLGRV------------DWTALPITLPiGLSVALIMNYQ-----NLPDIDTDRATGKRT-- 207 Syntrophus a...
BAM00372        160 VA-FG-FLSLISAYY-----AQTHTl----------SWLPVLGGLPiSLLVLLVVLSQ-----NLTTQRRDWLIGKRT-- 215 Caldilinea a...
EEH55642        230 PVVKLGLERAIRTl-rCALAIGMGWIG------------------ALPRMGALAVFLCSPLAIaIARYATEHEATPERLF 290 Micromonas p...
WP_012175513    196 LSCLLGIRGTFVFs--AAVFLIA---Lpgflvyf-----kwyfgwQLFYLFLLSIIPVLAFFSrWFLKAINNPAKADYSH 265 Desulfococcu...
WP_013632819    197 LSILLGIKGSFIFs-aLVFITGFV--Llynyw--------lmhsqLFKFYVFILFALPMLFYFsWWFYQCIKDEKQASYK 265 Pseudopedoba...
jgi:Solca_3274  201 ISYKLGYRGTFAFc-cFAFLTSI---Icfyyyf-------revdlLNNFIILQLCFIPAVVYFfHWFYKVWRDSSAADFE 269 Solitalea ca...
jgilanl:CHU3793 199 ISYKLGYAGTFIFt--GIMFTITNVCYfiyfn--------ltgklNNFYLVQIFFIPIVAYYIyWFVKVLQDTKAANFKH 268 Cytophaga hu...
CCH02641        218 ISRLMGVRGTFVNa--WVCLVAAAVcffv-------------fysGGWPFWLMAALLAPGLIYlALITARVWQDPTTATY 282 Fibrella aes...
WP_013388868    210 TTVIFGFEKTKGYi--IRINFISLFIFyrv-------------awLQLNSLKSYTILAIPLICnLYLLYIKNKAKISSSY 274 Ilyobacter p...
Q6L2T0          205 FKEIY------------SLMLIPAFVItvy------------klyLFVFLVPAFIIAIIHIIYiHGDPFKITRKTNEIVF 260 Picrophilus ...
Q2LX93          208 LAVRLGRKGALNLlmaLW-----MGIYgsvailalvgylspvawcTLLTLPIPIKLRKIALATrDWVKLDDYGKYVRIFY 282 Syntrophus a...
BAM00372        216 LAVILGPERALDLnvfVA-----MLAYvsilav-------tvltpLPLWYLAGLATSPLAMGVfSEVNRSLTAPEDAVRL 283 Caldilinea a...
EEH55642        291 k-----tKYLAVR 298 Micromonas pusilla CCMP1545
WP_012175513    266 t------MRLSMI 272 Desulfococcus oleovorans
WP_013632819    266 n-----tMRMTLL 273 Pseudopedobacter saltans
jgi:Solca_3274  270 h-----tMKMNLI 277 Solitalea canadensis DSM 3403
jgilanl:CHU3793 269 t------MYMNLV 275 Cytophaga hutchinsonii ATCC 33406
CCH02641        283 ra----aMWMTRL 291 Fibrella aestuarina BUZ 2
WP_013388868    275 l------DKFVAV 281 Ilyobacter polytropus
Q6L2T0          261 i------DIISTL 267 Picrophilus torridus
Q2LX93          283 --------FINGI 287 Syntrophus aciditrophicus SB
BAM00372        284 rsaalkaAFWTTL 296 Caldilinea aerophila DSM 14535 = NBRC 104270
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