Conserved Protein Domain Family
Syndecan

?
pfam01034: Syndecan 
Syndecan domain
Syndecans are transmembrane heparin sulfate proteoglycans which are implicated in the binding of extracellular matrix components and growth factors.
Statistics
?
PSSM-Id: 426005
Aligned: 15 rows
Threshold Bit Score: 64.2867
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ESO05124      246 SIFNSPVILALIIGGVILSMLIFVLVVMFIVYRLRKKDEGSYALDENLKkksKNIE-Yt-KAPQAhnEF 312  Helobdella robusta
XP_023406350  238 SFLDRKEVLGGVIAGGIVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQ---ANGGaY--QKPTKqeEF 301  African savanna elephant
BAA75815      147 AFTHSSQFMAALIVGGCVGLLFAVCVIMLLAYRMRKKDEGSYALDEKKP---STAYqY-----TQgqEY 207  Pacific transparent sea ...
CAG00013      207 NLWERTEVLAAVIACGVVGFLCAVSLLLFLAYRMKKKDEGSYDLGDNKL---SNAQ-Yh-KAPTK--EF 268  spotted green pufferfish
XP_007663638  115 SIFERTEVLAALIAGGVVGLLFAVFLILLLVYRMKKKDEGSYDLGKKPI--------Yk-KAPTN--EF 172  platypus
XP_006007744  136 SIFERTEILAAVIAGCSVGLLFAILLIVLLIYRMKKKDEGSYETGKNPI--------Yk-KAPTN--EF 193  coelacanth
XP_002588429 1493 ALFSHPGVMAAVIGGAVVGLLCAILLIMFIVYRMKKKDEGSYSLEDHPAkklNTNA-Yg-KTSKEf-YA 1558 Florida lancelet
EFX80810      316 SFFAQPGILAAVIGGAVVGLLCAILLVMFIVYRMRKKDEGSYVLDEPKRnspNSNP-Y--NKNSR--EF 379  common water flea
EDW02148       54 SFFAQPGILAAVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALDEPKRs-pANNS-YakNANNR--EF 118  Drosophila grimshawi
EKC21352        1 MG--RPGLLAAVIGGAVVALLLTILLVMFIVYRMRKKDEGSYPLDEQKY---TNYS-Ym-KAPDK--EF 60   Pacific oyster
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap