4EYA


Conserved Protein Domain Family
NusB

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pfam01029: NusB 
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NusB family
The NusB protein is involved in the regulation of rRNA biosynthesis by transcriptional antitermination.
Statistics
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PSSM-Id: 460031
Aligned: 66 rows
Threshold Bit Score: 81.5449
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4EYA_G            5 KGARDTAFLVLYRWdlrgenpgELFKEVVEEKNIk--------NKDAYEYAKKLVDTAVRHIEEIDSIIEKHLKGWSIDR 76  Aquifex aeol...
jgi:Hhal_2321     3 TPPRVAAVHVLERV--------LERGETLDEALEaqf---srvSERNRSLLQALVYGALRWLTRLEAQVATLT-PRDDWR 70 
tigr:AHA_0256     1 MKTRAQAALVIQQV--------LDQGQSLSAVLPaaq---ekvAPRDRALLQELCYGTLRWLPRLDAAVGEMM-DKPLKN 68 
Q9K1K5            4 ALAQKLAADSIAAV---------AEGRNLQDVLAqirtahpdlMAQENGALQDIAYGCQRYLGSLKHMLAQ-MLKKPIG- 72  Neisseria me...
WP_011715206      6 VSERTMAAAAVSAM--------LSEHLPLETALEqqihqqsgtSPEMRGRAHEIVVGTIRHMALLEATLTRFM-QKDLKA 76  Magnetococcu...
tigr:DNO_0158     1 MKAREAAARTLFAV--------IEQRQSLNQLLPafk---nqlPDIDRALYQELVYGTLREYRSLSFLHNRLL-HQPLDK 68 
Q0VTE3           14 PDPRLSAVRALNRV---------LPGKGDGESLRevlr-dfplQGSDGGQMRDICFGVCRHLRPLNHWLNQ-QLSKPLKG 82  Alcanivorax ...
Q317Q8           15 PPARGAALEILRDV--------LDKKREAQSVLDsylk-dnrlSPQDAALCTELVYGYLRSEIRISWLIRRFL--KPDSR 83  Desulfovibri...
tigr:MSMEG_3065  18 dPARRVAFDVLRAV--------SERDAYANLALPamlr-ergiDGRDAAFATELTYGACRSLGLLDAVIERAA-GRPTDR 87 
Q9CEF3            3 kNARQTALDVLNDI--------FGNDAYANISLDrnlr-dselSTVDKAFVTALVYGVVSKKDLLEWHITPFL----KKE 69  Lactococcus ...
4EYA_G           77 LGYVERNALRLGVAELIFLKsKEPGRVFID-IVDLVKKY-ADEKAGKFVNGVLSAIYK 132 Aquifex aeolicus VF5
jgi:Hhal_2321    71 ADPLLRGLLVIGAWEAQGL--ATPAHAAVSeAVDAARRL-RRARAAGMVNAVLRKLHK 125
tigr:AHA_0256    69 KSRIFHYLILVGLYQLIYT--RIPAHAAVAeTVNAVKLL-KGTSLRGLINGVLRNFQR 123
Q9K1K5           73 -NPQLESLLLAALYQLHYT--RNAPHAVVNeAVESIAKI-GRGQYRSFANAVLRRFLR 126 Neisseria meningitidis serogroup B
WP_011715206     77 KHHYVRAVLLTALYQAQFM--RTPIHSAVDeAVKLVKQQpRDHNLSGFVNAVLRRSTE 132 Magnetococcus marinus
tigr:DNO_0158    69 -NPLPAIILNLGIYQLLRL--TLGDHGVVHeTVELCKKL-RCPAVSGLTNAVLRRVQR 122
Q0VTE3           83 SAQPVRLALLAGLYELWFS--NRPAHAIVNaYPQLCRKL-KAPWAAGLSNAVLRKASQ 137 Alcanivorax borkumensis SK2
Q317Q8           84 LPAELLLTMGISVYEILYLQ-RVPVYASVDwAVSYVRSR-FGTGLSRLANAVLRSIDR 139 Desulfovibrio alaskensis G20
tigr:MSMEG_3065  88 IDPVLLDLLRLGTYQLLRT--RVEPHAAVStTVEQAGIE-FDSARAGFVNGVLRTIsg 142
Q9CEF3           70 PKPWAKMLLLLTVYQILFMD-KVPTSAAVDeAVKIAKRR-DGQATANFINAVLRNFMR 125 Lactococcus lactis subsp. lactis
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