Conserved Protein Domain Family
EIAV_GP90
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pfam00971: EIAV_GP90 
EIAV coat protein, gp90
Equine infectious anaemia (EIAV). EIAV belongs to the family Retroviridae. EIAV gp90 is hypervariable in the carboxyl-end region and more stable in the amino-end region. This variability is a pathogenicity factor that allows the evasion of the host's immune response.
Links
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Statistics
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PSSM-Id: 250265
Aligned: 3 rows
Threshold Bit Score: 782.304
Created: 21-Mar-2022
Updated: 13-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P22427  42 SKNSMAESKEARDQEMNLKEESKEEKRRNDWWKIGMFLLCLAGTTGGILWWYEGLPQQHYIGLVAIGGRLNGSGQSNAIE 121 Equine infectious ane...
O36326  42 SKNSMAESKEARDQEMNLKEESKEEKRRNDWWKIGMFLLCLAGTTGGILWWYEGLPQQHYIGLVAIGGRLNGSGQSNAIE 121 Equine infectious ane...
Q66731  42 SKNSMAESKEARDQEMNLKEESKEEKRRNDWWKIGMFLLCLAGTTGGILWWYEGLSQQHYIGLVAIGGRLNGSGQSNAIE 121 Equine infectious ane...

P22427 122 CWGSFPGCRPFQNYFSYETNRSIHMNNNTATLLEAYHREITFIYKSSCTDSDHCQEYQCKKVNlnssdssnsvrvedVTN 201 Equine infectious ane...
O36326 122 CWGSFPGCRPFQNYFSYETNRSMHIDNNTATLLEAYHREITFIYKSSCTDSDHCQEYQCKKVN--------------LMN 187 Equine infectious ane...
Q66731 122 CWGSFPGCRPFQNYFSYETNRSIHMNNNTATLLEAYHREIPFIYKSSWTDSDHCQEYQCQKVDfnan------sfypVNE 195 Equine infectious ane...

P22427 202 TAEYWGFKWLECNQTENFKTILVPENEMVNINDTDTWIPKGCNETWARVKRCPIDILYGIHPIRLCVQPPFFLVQEKGIA 281 Equine infectious ane...
O36326 188 TTEYWGFKWLECNQTENFKTILVPENEMVNINDNDTWIPKGCNETWARVKRCPIDILYGIHPIRLCVQPPFFLVQGKGIA 267 Equine infectious ane...
Q66731 196 STEYWGFKWLECNQTENLKTILVPENEMVNINDSDTWIPKGCNETWARVKRCPIDILYGIHPIRLCVQPPFFLVQENGAA 275 Equine infectious ane...

P22427 282 DTSRIGNCGPTIFLGVLEDNKGVVRGDYTACNVRRLNINRKDYTGMYQVPIFYTCTFTNITSCNSEPIISVIMYETNQVQ 361 Equine infectious ane...
O36326 268 NTSRIGNCGPTIFLGVLEDNKGVVRGNYTACNVSRLEINRKDYTGIYQVPIFYTCNFTNITSCNNESIISVIMYETNQVQ 347 Equine infectious ane...
Q66731 276 NNSRISNCGPTIFLGVLEDNKGVIRGNSTICKVNITEIKRKDYTGIYQVPIFYTCNFTNITSCNNESIISVIMYETNQVQ 355 Equine infectious ane...

P22427 362 YLLCN-NNNSNNYNCVVQSFGVIGQAHLELPRPNKRIRNQSFNQYNCSINNKTELETWKLVNTSGITPLPIS 432 Equine infectious anemia viru...
O36326 348 YLLCN-NNNSDHYNCVIQSFGVIGQAHLELPRPNKRIRNQSFNQYNCSINNKTELETWKLVKTSGITPLPIS 418 Equine infectious anemia virus
Q66731 356 YLLCNkNNNSNNYNCVVQSFGVIGQAHLELPRLNKRIRNQSFNQYNCSINNKTELETWKLVKTSGITPLPIS 427 Equine infectious anemia virus
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