AIA62269 13 AARGRSGRVPFSFYMPVINNSSqPFYKVMPQNAVPKGQG-NKDQQIGYWNEQVR--WRMVKGTRKDLPSKWHFYYLGTGP 89 BtNv-AlphaCoV/S... AFD29248 1 MATPTVPVADASWFQPLKAQNKkNTTPSFKGDGVPINTSlDHKAAHGYWLRFNR--QKPGGA---QLPPSFAFYYTGTGP 75 Common moorhen ... AFD29230 1 MAVPRVPRADASWFQPIKAQNKkITAPSFKKNGVPVNASlQAADQHGYWLRYNR--TKSGGG---SIPAAFSFYYTGTGP 75 Night heron cor... YP_005352875 1 MAVPSVPKADCSWFQIIKAQNKkVQPLAFKGDGVPINTTlPKEMCHGYWLRYKR--VKPGGA---PLPPSYSFYYTGTGP 75 Wigeon coronavi... YP_009113031 49 QASGGNVVPFYSWFSGITQFQKgQEFGFEQGQGVPLTNGvPPSEEKGYWYRHNRksYRTADGQQRQLLPRWYFYYLGTGP 128 Betacoronavirus... AOG30826 50 EKPRAAPMQNVSWFAPLVQTGK-SDLKFAHGEGVPVSQGvDGTYQHGYWLRTQR--NFTKGGKSLTANPRWYFYYTGTGR 126 Rousettus bat c... AGX27807 31 PKPRPAPNVSVSWYTGITQHGK-QPLAFPAGQGVPLNANsTPKQNAGYWRRQDRk-LNTGNG-VKQLAPRWYFYYTGTGP 107 Betacoronavirus... A3EXA1 31 PKPRPAPNNTVSWYTGLTQHGK-NPLAFPPGQGVPLNANsTTAQNAGYWRRQDRk-INTGNG-VKQLAPRWFFYYTGTGP 107 Tylonycteris ba... ABN10900 30 TKPRPAPNTTVSWFTGLTQHGK-QPLAFPPGQGVPLNANsTPAQNAGYWRRQDRk-INTGNG-TKPLAPRWYFYYTGTGP 106 Bat coronavirus... AIA62285 40 RRPQGLPNNTASWFTALTQHGK-EGLKFPQGQGVPINTNsGRDDQIGYYRRATRr-VRGGDGKMKELSPRWYFYYLGTGP 117 BtRf-BetaCoV/JL...
AIA62269 90 HADLKFRQRQ--------QGVFWVAKEGAKAEPTG-LGTRGR---NAELTTPIFNPG--LPDSIEIVDQYsrp--nsRAS 153 BtNv-AlphaCoV/S... AFD29248 76 RGNLKYGEFPpnes-kgnSRITWVHVKDADTSIKPkVAKRNPqnpKHALLPLRFPPGdgPAQGF-------------RID 141 Common moorhen ... AFD29230 76 YATLKFGETPs-------DRITWVKGPSAVTTNKPkVAKRDPd--KHPLLPLTFPPGdgVNTGL-------------RVD 133 Night heron cor... YP_005352875 76 RATLKYGELQdsdnqdnvNRVLWVKSPDADTSIKPkVAKRNPd--KHPLLPLRFKPGdgPVQGF-------------RID 140 Wigeon coronavi... YP_009113031 129 YANKQYGSDI--------DGVVWVASPNVDVRSPAdVPDRDPt--SHQAEPTRFAPGtvLPKGYYVEGSG-------RSA 191 Betacoronavirus... AOG30826 127 YADLRFGTRQ--------PDILWVGRNGANVNKVGnMGTRNPn--NDSAIPVQLPEG--IPKGFYAEGT--------RSR 186 Rousettus bat c... AGX27807 108 EANLPFRTVK--------DGIYWVWEEGASEAPSD-FGTRNPa--NDAAIVTQFAPGtqLPKNCHIEGTGgnsqsssRAS 176 Betacoronavirus... A3EXA1 108 EANLPFRSVK--------DGIVWVYEEGATDAPSV-FGTRNPa--NDAAIVCQFAPGtlIPKNFHIEGTGgnsqsssRAS 176 Tylonycteris ba... ABN10900 107 EANLPFRSVK--------DGIIWVHENGATDAPSV-FGTRNPa--NDPAIVTQFAPGttLPKNFHIEGTGgns--qsSSR 173 Bat coronavirus... AIA62285 118 EASLPYGANK--------EGIVWVATEGALNTPKDhIGTRNPn--NNAAIVLQLPQGttLPKGFYAEGSRs------GSQ 181 BtRf-BetaCoV/JL...
AIA62269 154 SRARSQSndqgnRSRSQ--SNNRAQSNNRSQSRGRQNQNqnnqptgdggsngqrnqprnrsnsrnrsgnqgrnggsQQDL 231 BtNv-AlphaCoV/S... AFD29248 142 PFQPQRG-----RGMER-------GPTQRSQSANPRQND----------------------------------------- 168 Common moorhen ... AFD29230 134 PF-QNRG-----RTMDR-------GPNQRSSSAPVDSGN----------------------------------------- 159 Night heron cor... YP_005352875 141 PF----------QSRGR--------SVERGQQDRRAQSA----------------------------------------- 161 Wigeon coronavi... YP_009113031 192 PSSRSSS-----RASSR--ASSVGGSRSRNNSASRNNTS---------------------------------------EV 225 Betacoronavirus... AOG30826 187 NSSRSSS-----RGSSRntSASNSRANSRASSPGRNLPPqa----------------------------------gSEPW 227 Rousettus bat c... AGX27807 177 SASRNSS-----RSNSR-----GSQPGSRSHSPGSVGPS--------------------------------------DAS 208 Betacoronavirus... A3EXA1 177 SNSRNSS-----RSSSR---GGRSTSNSRGTSPVSHGVGsa----------------------------------eSLAA 214 Tylonycteris ba... ABN10900 174 ASSRSSS-----RSSSR---NGRSNSNSRNASPAPHGVGdv----------------------------------vGAGT 211 Bat coronavirus... AIA62285 182 ASSRSSS-----RSRGN--SRISTPGSSRGNSPARVASGg-----------------------------------gETAL 219 BtRf-BetaCoV/JL...
AIA62269 232 VAAVREALAGMGFKPNTSGsGRNTPVKVPKGDKPLNKptkapASQVEKPVWKRTPHSQENVEVCFGPRDTYQ---NFGDS 308 BtNv-AlphaCoV/S... AFD29248 169 ----------------------AGNRRRAASAPGTNR-----SKTHTHAIPKRTLQKGKTISAVFGKRSPAGs--NVGSA 219 Common moorhen ... AFD29230 160 ----------------------RNQRARSKSAPSRTN-------PKTHQIPKRTLTKGKTISQVFGKRTPGGa--NVGSA 208 Night heron cor... YP_005352875 162 --------------------EPQRPKQRERSRSAPSR-----AAPKQHAIPKRVLLKGKTISGTFGKRSPAKa--NVGSP 214 Wigeon coronavi... YP_009113031 226 TPDMADQIASLVLAKLNKE--SGKPVQVTKQTAKEIK-----QKILNKPRQKRTPNKQCTVQQCFGKRGPSQ---NFGGG 295 Betacoronavirus... AOG30826 228 MAYLVQKLQALESKVDGKK-PEKTPQKVTKQGAANMA---------DKLRHKRTPHKGSGVTQNFGRRGPGDlegNFGDL 297 Rousettus bat c... AGX27807 209 ALLYLELAKRLEALEAGKS--KSAPKVITKKDAADAK---------KKMRHKRVATKAYNPTQAFGLRGPGDlqgNFGDL 277 Betacoronavirus... A3EXA1 215 LPLLLDLQKRLADLESGKS---KQPKVVTKKDAAAAK---------NKMRHKRVATKGFNVTQAFGLRGPGPlqgNFGDM 282 Tylonycteris ba... ABN10900 212 LSVLLDLQKRLADLEAGKG--TKQPKVITKKDAQAAK---------QKMRHKRVATKGYNVVQAFGMRGPGPlqsNFGDM 280 Bat coronavirus... AIA62285 220 ALLLLDRLNQLESKVSGKG-QQQQGQTVTKKSASEAS---------KKPRQKRTATKQYNVTQAFGRRGPDQtqgNFGDQ 289 BtRf-BetaCoV/JL...
AIA62269 309 QLVRLGVDYPHYPQIGELIPSQAALLFGSEITAH---------ERGD-NI------QLTYIYKMEVPKDHKSLAAFLPHI 372 BtNv-AlphaCoV/S... AFD29248 220 DTEKAGMADGRIMALARQVPGVQEMLFAGHLSHQ---------FQAD-AV------TLTWTYSITIKSDSSDYDRIKQAL 283 Common moorhen ... AFD29230 209 DTEKAGFTDPRLMCLMRHTPGTQELLLAGHLDHD---------IQPE-GV------YLKFTYTTQVKRDSAEYDRVIAAL 272 Night heron cor... YP_005352875 215 DTEKTGLGDPRLMALMRFVPGTQELLFAGHLKHK---------MQPE-GV------QLTFTYDITVKRDNKDFDRIVEAL 278 Wigeon coronavi... YP_009113031 296 SMLKLGTSDPQFPILAELAPTAGAFFFGSKLELAkvnnmsgaaDEPQkDVy-----ELRYSGAIRFDSTLPGFETIMKVM 370 Betacoronavirus... AOG30826 298 EMLKLGTDDPRFPAAAQMAPTAAAFLFMSHFDTR---------EEND-AT------WLNYRGAIKLPKDNPNYATWMKLL 361 Rousettus bat c... AGX27807 278 KYCKEGVDDPRWPQMAELAPSASAFLSMSQLKLV---------HHSN-DTdnkpvyMLRYSGAIKLDPKNPNYSKWLEIL 347 Betacoronavirus... A3EXA1 283 NYNKFGTEDPRWPQMAELAPSASAFMSMSQFKLT---------HQSN-DDkgdpiyFLSYSGAIKLDPKNPNYKKWLELL 352 Tylonycteris ba... ABN10900 281 QYNKLGTEDPRWPQIAELAPSASAFMSTSQFKVT---------HQSN-DEngepvyFLSYSGAIKLDPKNPNYNKWMEIL 350 Bat coronavirus... AIA62285 290 ELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGME---------VTPS-GT------WLTYHGAIKLDDKDPQFKDNVILL 353 BtRf-BetaCoV/JL...
AIA62269 373 GAYADSTed------vTLPPALPPkqq---------------rlrRSASTEVLADTTS 409 BtNv-AlphaCoV/SC2013 AFD29248 284 DTVVDQT---------YEAPIKEKkqpak-----------qqpkqDKPKPQRSPKKQD 321 Common moorhen coronavirus HKU21 AFD29230 273 NNVVNQK---------YDADNLPSqkpk--------------stkPKPKKEKKERAPP 307 Night heron coronavirus HKU19 YP_005352875 279 NSVVDMVyepegeirkDQQSKKDTqpk---------------kkaEKKTPTNPQKQPD 321 Wigeon coronavirus HKU20 YP_009113031 371 NENLDAYqhte--egaQLLSPKFQrkq---------------kkgQVEKDNVSAATPK 411 Betacoronavirus HKU24 AOG30826 362 KENVDAY---------KDFPQTPEret---------------kkkKKDVVVEDVTVVE 395 Rousettus bat coronavirus AGX27807 348 EGNIDAY---------KNFPKKEKkqkqsqikqeaedpewdstdlFSQPLQDPDNQPK 396 Betacoronavirus Erinaceus/VMC/DEU/2012 A3EXA1 353 ESNIDAY---------KTFPKKERkpkttedga----vasssasqMEDVDAKPQRKPK 397 Tylonycteris bat coronavirus HKU4 ABN10900 351 DANIDAY---------KSFPKKERkqkpsgd-------daaiapaTSQMEDVPELPPK 392 Bat coronavirus HKU5-3 AIA62285 354 NKHIDAY---------KTFPPTEPkkdkk-----------kktdeAQPLPQRKK-QPT 390 BtRf-BetaCoV/JL2012
Lu S et al.(2020). "CDD/SPARCLE: the conserved domain database in 2020.",