4JC0


Conserved Protein Domain Family
UPF0004

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pfam00919: UPF0004 
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Uncharacterized protein family UPF0004
This family is the N terminal half of the Prosite family. The C-terminal half has been shown to be related to MiaB proteins. This domain is a nearly always found in conjunction with pfam04055 and pfam01938 although its function is uncertain.
Statistics
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PSSM-Id: 425946
Aligned: 111 rows
Threshold Bit Score: 73.3137
Created: 16-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4JC0_A            2 RVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDV--K-DADVVVLDTCAFIEDAKRESIDEIFSFVDAKdQyGYKLVVKG 78  Thermotoga m...
Q8TWF4            3 KVAVEVYGCAANHDDGRLVRELLRREGFEVVEDA--E-NADVAVLLTCIVRDSVDARMVNRMRELER------VPTVVAG 73  Methanopyrus...
jgi:Nmar_1261     3 KIFVESYGCSASFADSEMISGLILNGGHTLVEDS--S-ESDLNVVVTCSVKDATANKMVHRIKSLKT------KPLVVAG 73  Nitrosopumil...
Q4DXJ3           50 TVFIHTFGCSHNVSDGEYMAGLLAQAGYRVTDVF--N-GADVYLLNSCTVKNPSEEHFISMMNRVRATG----KPLVVAG 122 Trypanosoma ...
jgi:OSTLU_14633  39 KIFVHTFGCSHNHSDSEFMAGQLRRYGYELVDAP--E-KADGWLVNTCTVKNPSQSAMNTVIERGKAAN----KAMVIAG 111 Ostreococcus...
Q2NHC4            2 KIYLETHGCTFNQADTDIMANILAKK-YDIVYDV--E-EADVIILNTCYVKLPTEQKMITKIRKYKTEF-P-DKKLIIGG 75  Methanosphae...
Q12WA5            2 KVHITTYGCSANQASSEIMIASVRDLGYELVDEM----DAEVVVINTCTVKYTTEQKILHKIEDLGAKG----IDVVVTG 73  Methanococco...
Q8TRM2            2 KVYLESFGCSASLASAEIMKASVERLGHELLNPAaaG-EAEVYICNSCTVKYTTEQKILYKIRSMGEKG----VQVIVSG 76  Methanosarci...
Q6MLR6            2 KYQVHTFGCKVNTYDAGLIQKNLNASGFMPVVSG--QkDARIHVLNTCAVTAEATKEAVRYIRRLKVKD-P-FCTIVVTG 77  Bdellovibrio...
Q9WZT7            3 TVRIETFGCKVNQYESEYMAEQLEKAGYVVLPDG----NAAYYIVNSCAVTKEVEKKVKRLIKSIRNRN-K-NAKIILTG 76  Thermotoga m...
4JC0_A           79 CLVQRYY--EELKKEIP-EVDQWIG 100 Thermotoga maritima
Q8TWF4           74 CFPEAYP--ERARKLRP--DAALVG 94  Methanopyrus kandleri
jgi:Nmar_1261    74 CLPKAEK--ETVEKFSE--NASLLG 94  Nitrosopumilus maritimus SCM1
Q4DXJ3          123 CVPQADP------RNTQwDDVSVIG 141 Trypanosoma cruzi
jgi:OSTLU_14633 112 CVPQGDKgaKELRD------VSLLG 130 Ostreococcus lucimarinus CCE9901
Q2NHC4           76 CMVEVDD--KRLEKFAG--DDCWIG 96  Methanosphaera stadtmanae DSM 3091
Q12WA5           74 CMPQVQL--ETILERNP--DAHILG 94  Methanococcoides burtonii DSM 6242
Q8TRM2           77 CMPEVQL--EEILHANP--EAHILG 97  Methanosarcina acetivorans
Q6MLR6           78 CAAQVDT--GSFSSLPGa--DLIVA 98  Bdellovibrio bacteriovorus
Q9WZT7           77 CFAQLSP--DEAKNLPV---DMVLG 96  Thermotoga maritima MSB8
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