6KGS,6HZQ,6HZO,3PBO,3UN7,2WAF,6G9P


Conserved Protein Domain Family
Transpeptidase

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pfam00905: Transpeptidase 
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Penicillin binding protein transpeptidase domain
The active site serine is conserved in all members of this family.
Statistics
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PSSM-Id: 425939
Aligned: 40 rows
Threshold Bit Score: 129.073
Created: 16-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6KGS_A   221 VSAVVLDAKTGEVLAMANDNTFDpsqdigrqgdkqlgnpaVSSPFEPGSVNKIVAASAVIEHGLSSPDEVLQVPGSIQMG 300 Mycobacterium tuber...
AKC98311  42 GCFLLYDASTNAEIAQFNKAK-------------------CATQMAPDSTFKIALSLMAFDAEIID-QKTIFKWDKTPKG 101 Salmonella sp. Nsa292
KTC82857  23 TCFLVQENQT--VLKHEGKD--------------------CNKRFAPESTFKIALSLMGFDSGILK-DTLNPEWPYKKEY 79  Legionella cherrii
Q9K319    24 TGCFLYADGNGQALSSEGD---------------------CSSQLPPASTFKIPLALMGYDSGFLV-DEEHPALPFKPGY 81  Aeromonas hydrophila
Q9ZHF7    25 ICTIVADAATGKAVLHEGK---------------------CDERVTPASTFKLALAVMGFDHGFLK-DEHTPVEHFRHGD 82  Ralstonia pickettii
Q9F0V2    53 GVIII---KEGKNLSTYGNALAR-----------------ANKEYVPASTFKMLNALIGLENHKATTNE-IFKWDGKKRT 111 Acinetobacter bauma...
Q7AUV5    35 GTIVIESLTTRQRLVHNDPR--------------------AQQRYPAASTFKVLNTLIALEEGAISGENQIFHWNGTQYS 94  uncultured bacterium
Q9EY51    42 GTIVVVDERTNGNSTSVYNESR------------------AQQRYSPASTFKIPHTLFALDAGAVRDEFHVFRWDGAKRS 103 Acinetobacter bauma...
Q55926    76 GTIVVLDQRGGAHQLWVYNQER------------------ADRAYSPASTFKIPHSLFALDAGVVRDEFQVFEWDGVERN 137 Synechocystis sp. P...
AHY82863  42 GTIVVADERQTDRVILVFDQVR------------------SEKRYSPASTFKIPHTLFALDAGAARDEFQVFRWDGIKRS 103 Acinetobacter sp. N...
6KGS_A   301 GVTvHDAWEHGVmpyTTTGVFGKSSNVGTLMLSQRVGPERYYDMLRKFGLGQRTGVGLPGESAG-LVPPidQWSGSTfan 379 Mycobacterium tuber...
AKC98311 102 ----MEIWNSNH---TPKTWMQFSVVWVSQEITQKIGLNKIKNYLKDFDYGNQDFSGDKERNNG--LTE--AWLESS--- 167 Salmonella sp. Nsa292
KTC82857  80 ELY-LNVWKYPH---NPRTWIRDSCVWYSQVLTQQLGMTRFKNYVDAFHYGNQDISGDKGQNNG--LTH--SWLSSS--- 148 Legionella cherrii
Q9K319    82 DDW-LPAWRETT---TPRRWETYSVVWFSQQITEWLGMERFQQYVDRFDYGNRDLSGNPGKHDG--LTQ--AWLSSS--- 150 Aeromonas hydrophila
Q9ZHF7    83 PDWgGEAWHQPI---DPALWLKYSVVWYSQRITHAMGAQTFQAYVRKLGYGNMDVSGDPGKNNG--MDR--SWITSS--- 152 Ralstonia pickettii
Q9F0V2   112 ----YPMWEKDM---TLGEAMALSAVPVYQELARRTGLELMQKEVKRVNFGN--------TNIGtQVDN--FWLVGP--- 171 Acinetobacter bauma...
Q7AUV5    95 ----IANWNQDQ---TLDSAFKVSCVWCYQQIALRVGALKYPAYIQQTNYGH-----LLEPFNG---TE--FWLDGS--- 154 uncultured bacterium
Q9EY51   104 ----FAGHNQDQ---NLRSAMRNSTVWVYQLFAKEIGENKARSYLEKLNYGN----ADPSTKSG----D--YWIDGN--- 163 Acinetobacter bauma...
Q55926   138 ----FAPHNQDQ---TLRSAMRNSAVWVYEIFAAEIGEAKAREYLTQIDYGN----VDSSTSKG----A--YWIDGA--- 197 Synechocystis sp. P...
AHY82863 104 ----FAAHNQDQ---DLRSAMRNSTVWIYELFAKEIGEDKARRYLKQIDYGN----ADPSTSNG----D--YWIDGN--- 163 Acinetobacter sp. N...
6KGS_A   380 lpigqgLSMTLLQMTGMYQAIANdgvrvppriikatvapdgsrteeprpdDIRVVSAQTAQTVR-QMLRAVVQRDpmgyq 458 Mycobacterium tuber...
AKC98311 168 ------LKISPEEQIQFLRKIIN---------------------------HNLPVKNSAIENTI-ENMYLQDLDN----- 208 Salmonella sp. Nsa292
KTC82857 149 ------LAISPSEQIQFLQKIVN---------------------------KKLSVNPKAFTMTK-DILYIQELAG----- 189 Legionella cherrii
Q9K319   151 ------LAISPQEQARFLGKMVS---------------------------GKLPVSAQTLQYTA-NILKVSESDG----- 191 Aeromonas hydrophila
Q9ZHF7   153 ------LKISPEEQVGLMRRIVN---------------------------RQLPVSAHTYEMLD-RTVQTWQVPG----- 193 Ralstonia pickettii
Q9F0V2   172 ------LKITPVQEVNFADDLAH---------------------------NRLPFKLETQEEVKkMLLIKEVNGS----- 213 Acinetobacter bauma...
Q7AUV5   155 ------LTISAEEQVAFLRRVVE---------------------------RKLPFKASSYDSLK-KVMFADENAQ----- 195 uncultured bacterium
Q9EY51   164 ------LAISANEQISILKKLYR---------------------------NELPFRVEHQRLVK-DLMIVEAKRD----- 204 Acinetobacter bauma...
Q55926   198 ------LTISAQEQIHFLQKLYQ---------------------------NELPFRIEHQRLVK-DIIIVEAGRN----- 238 Synechocystis sp. P...
AHY82863 164 ------LAIAAQEQIAFLRKLYH---------------------------NELPFRVEHQRLVK-DLMIVEAGRN----- 204 Acinetobacter sp. N...
6KGS_A   459 qgtgptagvpGYQMAGKTGTAQQINPGCGCYFDDVY---WITFAGIATA-DNPRYVIGIMLDNPArnsdgAPGHSAAP-- 532 Mycobacterium tuber...
AKC98311 209 ----------STKLYGKTGAGFTANRTLQNG----------WFEGFIISkSGHKYVFVSALTGNLgsnltSSIKAKKNai 268 Salmonella sp. Nsa292
KTC82857 190 ----------GWKLYGKTGNGRQLTKDKSQKLS-LQ---HGWFIGWIEK-DGRVITFTKHIADSKkhvtfASFRAKNE-- 252 Legionella cherrii
Q9K319   192 -----------WQIHGKTGMGYPKKLDGSLNRE-QQ---IGWFVGWASK-PGKQLIFVHTVVQKPgk-qfASLKAKEE-- 252 Aeromonas hydrophila
Q9ZHF7   194 ----------GWAVQGKTGTAGPAPGNTSPDGTWDQahaYGWFVGWARK-GDKTYVFANLIQDDKveptsGGIRSRDA-- 260 Ralstonia pickettii
Q9F0V2   214 ------------KIYAKSGWGMGVTPQVG------------WLTGWVEQaNGKKIPFSLNLEMKEg----MTGSIRNE-- 263 Acinetobacter bauma...
Q7AUV5   196 -----------YRLYAKTGWATRITPSVG------------WYVGYVEA-QDDVWLFALNLATRDa----NDLPLRTQ-- 245 uncultured bacterium
Q9EY51   205 -----------WILRAKTGWDGQMG----------------WWVGWVEWpTGPVF-FALNIDTPNr---mEDLHKREA-- 251 Acinetobacter bauma...
Q55926   239 -----------WILRAKTGWEGRWG----------------WWVGWVEWpTGPVF-FALNIDTPNr---lDDLYKREA-- 285 Synechocystis sp. P...
AHY82863 205 -----------WILRAKTGWEGRMG----------------WWVGWVEWpTGPVF-FALNIDTPNr---mDDLFKREA-- 251 Acinetobacter sp. N...
6KGS_A   533 -LFHNIAG 539 Mycobacterium tuberculosis H37Rv
AKC98311 269 tILNTLNL 276 Salmonella sp. Nsa292
KTC82857 253 -TLNQLFY 259 Legionella cherrii
Q9K319   253 -VLAALPA 259 Aeromonas hydrophila
Q9ZHF7   261 -LFARLSE 267 Ralstonia pickettii
Q9F0V2   264 -ITYKSLE 270 Acinetobacter baumannii
Q7AUV5   246 -IAKDALK 252 uncultured bacterium
Q9EY51   252 -IARAILQ 258 Acinetobacter baumannii
Q55926   286 -ITRDILQ 292 Synechocystis sp. PCC 6803
AHY82863 252 -IVRAILR 258 Acinetobacter sp. NF130815198A(179)
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