5MPP


Conserved Protein Domain Family
DMRL_synthase

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pfam00885: DMRL_synthase 
6,7-dimethyl-8-ribityllumazine synthase
This family includes the beta chain of 6,7-dimethyl-8- ribityllumazine synthase EC:2.5.1.9, an enzyme involved in riboflavin biosynthesis. The family also includes a subfamily of distant archaebacterial proteins that may also have the same function. The family contains a number of different subsets including a family of proteins comprising archaeal lumazine and riboflavin synthases, type I lumazine synthases, and the eubacterial type II lumazine synthases. It has been established that lumazine synthase catalyzes the penultimate step in the biosynthesis of riboflavin in plants and microorganisms. The type I lumazine synthases area active in pentameric or icosahedral quaternary assemblies, whereas the type II are decameric. Brucella, a bacterial genus that causes brucellosis, and other Rhizobiales have an atypical riboflavin metabolic pathway. Brucella spp code for both a type-I and a type-II lumazine synthase, and it has been shown that at least one of these two has to be present in order for Brucella to be viable, showing that in the case of Brucella flavin metabolism is implicated in bacterial virulence.
Statistics
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PSSM-Id: 425929
Aligned: 603 rows
Threshold Bit Score: 75.134
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5MPP_i         12 GLRFGIVASRFNHALVDRLVEGAIDCIVR-HG-GReeDITLVRVPGSWEIPVAAGELARkED-I--DAVIAIGVLIRGAT 86  Aquifex aeolicus
Q6L153          1 mIRIGMVVAEFNYDITMMMLERARSYAEF-LG-VE--VHKILRVPGSFDMPLAIKKLLMdn---diDGVVTIGAVIKGET 73  Picrophilus to...
AGI85756        3 AYKIGAVVAEFNYEVTMLMMERAKAEAEF-LG-VE--ITKVIKVPGVFDMPLAIKKLLEcd---diDAVITLGAVIKGET 75  Candidatus Met...
EDY37082        3 KINLGIVVSEYNYDITMMMLERAKEHAEF-LG-AD--VKYVLKAPGTFDIPLLVRKLLEkk---dvDAVVTLGAVIEGET 75  Aciduliprofund...
EQB67132        1 -mNIGIVVSEYNYDITMMMLQRAKEHAEF-LG-AK--VTEVFKAPGTYDIPLAVKHLLLkd---niDGVATLGAVIKGET 72  Thermoplasmata...
EQB72368        1 -MKIGIVVSEYNYDITMMMLQRAQEHAAF-MN-LE--VTHVLKVPGTFDIPLGVKKILEkk---dvDGAVTLGAVIKGET 72  Thermoplasmata...
EQB68419        1 -MKIGIVVSEYNYDITMMMLERAIDHVKF-LG-GE--VSEVLKVPGTFEIPLGVKRLIEag---nvDGVVTLGAVIQGET 72  Thermoplasmata...
Q00VV4         93 PVRLGVCVGEFHNKLMDRMLEDARVAAET-MG-AT--IDRVMWVPGTYEAPLVVENMLQdp---tlDACVVLGYIEKGST 165 Ostreococcus t...
XP_003059701  139 PVRVGVVIGEFHNVLMDRMLEDARVAAIA-MG-AT--VDEVVWVPGTYEAPLVVERMLEnd---alDAVCVIGYIEKGST 211 Micromonas pus...
jgi:Amuc_0423  15 RAKICIVASEYNEQYTQALVENCSEELKTvLPsV---RLEIIRVPGAFEIPVAIKSVLSrSPeKrpDAVVALGVILRGST 91  Akkermansia mu...
5MPP_i         87 PHFDYIASEVSKGLANLSLELRKPITFGVITAD-TLEQAIERAgtkH---GNKGWEAALSAIEM 146 Aquifex aeolicus
Q6L153         74 DHHKIIMDNVSRKITDLSLEYNKPVALGISGPGeSRLQAEARI--------DMAKEAVESCVKM 129 Picrophilus torridus DSM 9790
AGI85756       76 KHDEVIMAQAARKITDLALDYDKPVALGVTGPDmTELQAVDRI--------EKGRDAIDAVVKM 131 Candidatus Methanomethylophilu...
EDY37082       76 EHDEIVMQNAARKIEDLSVEFGKPVTLGISGPGeSRLQAEARI--------EKARDAVEAAIKL 131 Aciduliprofundum boonei T469
EQB67132       73 DHDEVIMNNAARKIMDLSVEYSKPVTLGISGPGeTRLQAQVRI--------EGAKDAIEGLVKM 128 Thermoplasmatales archaeon E-p...
EQB72368       73 DHDQIIMQNAARKIEDLSVEYSKPVALGISGPNqTRLQAQARI--------EMARDAVESVAKM 128 Thermoplasmatales archaeon A-p...
EQB68419       73 DHDDIIMQNAARKIMDISIETGMPVSLGVTGPGqTRLQAEARI--------EKARSAVEAVIKM 128 Thermoplasmatales archaeon Gpl
Q00VV4        166 LHGQEMGSTFSIIAKQLELEYGKPVGMGIIGPGaTAEQAEERV--------AYAGNAVRASVRM 221 Ostreococcus tauri
XP_003059701  212 LHGQEMGATCSLIFKQLELEYNKPVGMGIIGPGaTAEQAEGRV--------AYAGNGMRAAIRM 267 Micromonas pusilla CCMP1545
jgi:Amuc_0423  92 DHADLIGSTITQALMQLALEFTTPVIHEVLLLN-DEKQAFARC---IasqLNRGREAARTAARM 151 Akkermansia muciniphila ATCC B...
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